STRINGSTRING
PV09_04210 PV09_04210 PV09_05916 PV09_05916 PV09_07349 PV09_07349 PV09_07598 PV09_07598 PV09_02507 PV09_02507 PV09_03033 PV09_03033 PV09_09116 PV09_09116 PV09_01219 PV09_01219 PV09_04458 PV09_04458 PV09_07191 PV09_07191 TIF6 TIF6 PV09_01438 PV09_01438 PV09_07695 PV09_07695 PV09_07773 PV09_07773 PV09_00854 PV09_00854 PV09_02705 PV09_02705 PV09_00034 PV09_00034 PV09_08788 PV09_08788 PV09_01990 PV09_01990 PV09_09149 PV09_09149 PV09_03714 PV09_03714
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV09_04210Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (751 aa)
PV09_05916Uncharacterized protein. (540 aa)
PV09_07349Translation initiation factor RLI1. (604 aa)
PV09_07598C2H2-type domain-containing protein. (127 aa)
PV09_02507CP-type G domain-containing protein. (531 aa)
PV09_03033Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (659 aa)
PV09_09116Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (215 aa)
PV09_01219J domain-containing protein. (444 aa)
PV09_04458Uncharacterized protein. (886 aa)
PV09_07191Uncharacterized protein. (265 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (246 aa)
PV09_01438Uncharacterized protein. (597 aa)
PV09_07695ABC transporter ATP-binding protein ARB1. (620 aa)
PV09_07773Uncharacterized protein. (450 aa)
PV09_00854GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (217 aa)
PV09_0270540S ribosomal protein; Belongs to the universal ribosomal protein uS3 family. (260 aa)
PV09_00034CP-type G domain-containing protein. (675 aa)
PV09_08788Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (435 aa)
PV09_01990Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (635 aa)
PV09_09149Uncharacterized protein. (748 aa)
PV09_03714Importin N-terminal domain-containing protein. (1075 aa)
Your Current Organism:
Verruconis gallopava
NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014
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