35 items (Verruconis gallopava) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV09_02339	Serine-tRNA ligase. (472 aa)
	PV09_08277	Glutamine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (648 aa)
	PV09_07014	Uncharacterized protein. (1281 aa)
	PV09_00894	Threonine-tRNA ligase. (544 aa)
	PV09_01749	Glycine-tRNA ligase. (671 aa)
	PV09_02963	Arginine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (618 aa)
	PV09_02870	Arginine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (649 aa)
	PV09_01496	Isoleucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (1080 aa)
	PV09_04410	Arginine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (715 aa)
	PV09_00411	Phenylalanine-tRNA ligase, alpha subunit. (538 aa)
	PV09_07061	Glutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (637 aa)
	PV09_07345	Tyrosine--tRNA ligase. (399 aa)
	PV09_07420	Leucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (1116 aa)
	ALA1	Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (998 aa)
	PV09_07690	Tryptophan-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (393 aa)
	PV09_01775	AA_TRNA_LIGASE_II domain-containing protein. (510 aa)
	PV09_01684	Aspartate-tRNA(Asn) ligase. (1006 aa)
	PV09_02233	Aspartate-tRNA ligase. (697 aa)
	PV09_01495	Sfi1 domain-containing protein. (1122 aa)
	PV09_04202	AA_TRNA_LIGASE_II domain-containing protein. (608 aa)
	PV09_02188	Isoleucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (1007 aa)
	PV09_02450	AA_TRNA_LIGASE_II domain-containing protein. (562 aa)
	PV09_03859	Tryptophan-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (453 aa)
	PV09_05063	tRNA_SAD domain-containing protein. (343 aa)
	PV09_05859	Asparagine-tRNA ligase. (525 aa)
	PV09_06346	Lysine-tRNA ligase, variant. (613 aa)
	PV09_07169	Methionine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (587 aa)
	PV09_07075	Tyrosine--tRNA ligase. (499 aa)
	PV09_00819	Lysine--tRNA ligase. (629 aa)
	PV09_02768	Phenylalanine-tRNA ligase. (513 aa)
	PV09_03452	Asparagine-tRNA ligase. (568 aa)
	PV09_05379	Glutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (570 aa)
	PV09_07321	Methionine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (609 aa)
	PV09_08452	Leucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (960 aa)
	PV09_07576	Aspartate-tRNA(Asn) ligase. (557 aa)

Your Current Organism:

Verruconis gallopava

NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALA1	PV09_00411	A0A0D2ANU8	A0A0D2AS80	Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.	Phenylalanine-tRNA ligase, alpha subunit.	0.519
ALA1	PV09_00819	A0A0D2ANU8	A0A0D1Z7F5	Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.	Lysine--tRNA ligase.	0.639
ALA1	PV09_00894	A0A0D2ANU8	A0A0D1Y1S9	Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.	Threonine-tRNA ligase.	0.765
ALA1	PV09_01495	A0A0D2ANU8	A0A0D2ALB0	Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.	Sfi1 domain-containing protein.	0.538
ALA1	PV09_01496	A0A0D2ANU8	A0A0D2B8J3	Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.	Isoleucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.788
ALA1	PV09_01684	A0A0D2ANU8	A0A0D2AMN5	Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.	Aspartate-tRNA(Asn) ligase.	0.498
ALA1	PV09_01749	A0A0D2ANU8	A0A0D1XYE9	Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.	Glycine-tRNA ligase.	0.862
ALA1	PV09_01775	A0A0D2ANU8	A0A0D2AMW4	Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.	AA_TRNA_LIGASE_II domain-containing protein.	0.538
ALA1	PV09_02188	A0A0D2ANU8	A0A0D2AKF7	Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.	Isoleucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.724
ALA1	PV09_02233	A0A0D2ANU8	A0A0D2ALL3	Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.	Aspartate-tRNA ligase.	0.862
ALA1	PV09_02339	A0A0D2ANU8	A0A0D1Z0Y5	Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.	Serine-tRNA ligase.	0.644
ALA1	PV09_02450	A0A0D2ANU8	A0A0D2AJJ2	Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.	AA_TRNA_LIGASE_II domain-containing protein.	0.685
ALA1	PV09_02768	A0A0D2ANU8	A0A0D1Z018	Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.	Phenylalanine-tRNA ligase.	0.613
ALA1	PV09_02870	A0A0D2ANU8	A0A0D1XUJ8	Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.	Arginine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.442
ALA1	PV09_02963	A0A0D2ANU8	A0A0D1XUW1	Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.	Arginine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.442
ALA1	PV09_03452	A0A0D2ANU8	A0A0D1YY31	Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.	Asparagine-tRNA ligase.	0.723
ALA1	PV09_03859	A0A0D2ANU8	A0A0D2AFR8	Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.	Tryptophan-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.639
ALA1	PV09_04202	A0A0D2ANU8	A0A0D1XQW9	Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.	AA_TRNA_LIGASE_II domain-containing protein.	0.728
ALA1	PV09_04410	A0A0D2ANU8	A0A0D2AZY2	Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.	Arginine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.442
ALA1	PV09_05379	A0A0D2ANU8	A0A0D1YSM4	Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.	Glutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.752

page 1 of 57

Server load: low (16%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About