20 items (Verruconis gallopava) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV09_09707	Uncharacterized protein. (114 aa)
	PV09_09624	TPR_REGION domain-containing protein. (1438 aa)
	PV09_02936	Alpha-L-AF_C domain-containing protein. (527 aa)
	PV09_06055	Uncharacterized protein. (1727 aa)
	PV09_09845	Uncharacterized protein. (253 aa)
	PV09_09813	Uncharacterized protein. (242 aa)
	PV09_09309	Uncharacterized protein. (151 aa)
	PV09_09650	HET domain-containing protein. (524 aa)
	PV09_09555	Uncharacterized protein. (76 aa)
	PV09_09211	HET domain-containing protein. (816 aa)
	PV09_08061	C2H2-type domain-containing protein. (874 aa)
	PV09_08351	Uncharacterized protein. (891 aa)
	PV09_07815	TPR_REGION domain-containing protein. (1169 aa)
	PV09_00267	Uncharacterized protein. (582 aa)
	PV09_09814	HET domain-containing protein. (479 aa)
	PV09_09554	Uncharacterized protein. (71 aa)
	PV09_08488	HET domain-containing protein. (635 aa)
	PV09_08491	HET domain-containing protein. (809 aa)
	PV09_01887	Uncharacterized protein. (543 aa)
	PV09_00325	TPR_REGION domain-containing protein. (786 aa)

Your Current Organism:

Verruconis gallopava

NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV09_07815	PV09_09707	A0A0D2A1N0	A0A0D1X8X1	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.447
PV09_08488	PV09_09309	A0A0D2ALL7	A0A0D1ZWR4	HET domain-containing protein.	Uncharacterized protein.	0.899
PV09_09309	PV09_08488	A0A0D1ZWR4	A0A0D2ALL7	Uncharacterized protein.	HET domain-containing protein.	0.899
PV09_09309	PV09_09813	A0A0D1ZWR4	A0A0D1ZV06	Uncharacterized protein.	Uncharacterized protein.	0.813
PV09_09309	PV09_09845	A0A0D1ZWR4	A0A0D1ZUV9	Uncharacterized protein.	Uncharacterized protein.	0.899
PV09_09707	PV09_07815	A0A0D1X8X1	A0A0D2A1N0	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.447
PV09_09813	PV09_09309	A0A0D1ZV06	A0A0D1ZWR4	Uncharacterized protein.	Uncharacterized protein.	0.813
PV09_09813	PV09_09814	A0A0D1ZV06	A0A0D2AHD1	Uncharacterized protein.	HET domain-containing protein.	0.833
PV09_09814	PV09_09813	A0A0D2AHD1	A0A0D1ZV06	HET domain-containing protein.	Uncharacterized protein.	0.833
PV09_09845	PV09_09309	A0A0D1ZUV9	A0A0D1ZWR4	Uncharacterized protein.	Uncharacterized protein.	0.899

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