12 items (Verruconis gallopava) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV09_00977	Uncharacterized protein. (778 aa)
	PV09_07575	Uncharacterized protein. (266 aa)
	PV09_05179	RNase_PH domain-containing protein. (194 aa)
	PV09_08075	HRDC domain-containing protein. (891 aa)
	PV09_01649	ECR1_N domain-containing protein. (346 aa)
	PV09_05134	Uncharacterized protein. (190 aa)
	PV09_02292	Uncharacterized protein; Belongs to the RNR ribonuclease family. (983 aa)
	PV09_00396	RNase_PH domain-containing protein. (346 aa)
	PV09_07806	Uncharacterized protein. (299 aa)
	PV09_01813	Uncharacterized protein. (208 aa)
	PV09_01507	CCHC-type domain-containing protein. (764 aa)
	PV09_02980	RNase_PH domain-containing protein. (367 aa)

Your Current Organism:

Verruconis gallopava

NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV09_00396	PV09_00977	A0A0D2ASS5	A0A0D2AMW6	RNase_PH domain-containing protein.	Uncharacterized protein.	0.481
PV09_00396	PV09_01507	A0A0D2ASS5	A0A0D2ALC0	RNase_PH domain-containing protein.	CCHC-type domain-containing protein.	0.555
PV09_00396	PV09_01649	A0A0D2ASS5	A0A0D1Z410	RNase_PH domain-containing protein.	ECR1_N domain-containing protein.	0.999
PV09_00396	PV09_01813	A0A0D2ASS5	A0A0D2AMC9	RNase_PH domain-containing protein.	Uncharacterized protein.	0.997
PV09_00396	PV09_02292	A0A0D2ASS5	A0A0D2AI88	RNase_PH domain-containing protein.	Uncharacterized protein; Belongs to the RNR ribonuclease family.	0.998
PV09_00396	PV09_02980	A0A0D2ASS5	A0A0D2AJ48	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.999
PV09_00396	PV09_05134	A0A0D2ASS5	A0A0D2AB60	RNase_PH domain-containing protein.	Uncharacterized protein.	0.999
PV09_00396	PV09_05179	A0A0D2ASS5	A0A0D1XMT2	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.999
PV09_00396	PV09_07575	A0A0D2ASS5	A0A0D1XFV3	RNase_PH domain-containing protein.	Uncharacterized protein.	0.999
PV09_00396	PV09_07806	A0A0D2ASS5	A0A0D2ANB2	RNase_PH domain-containing protein.	Uncharacterized protein.	0.999
PV09_00396	PV09_08075	A0A0D2ASS5	A0A0D1YHM7	RNase_PH domain-containing protein.	HRDC domain-containing protein.	0.955
PV09_00977	PV09_00396	A0A0D2AMW6	A0A0D2ASS5	Uncharacterized protein.	RNase_PH domain-containing protein.	0.481
PV09_00977	PV09_01507	A0A0D2AMW6	A0A0D2ALC0	Uncharacterized protein.	CCHC-type domain-containing protein.	0.940
PV09_00977	PV09_02292	A0A0D2AMW6	A0A0D2AI88	Uncharacterized protein.	Uncharacterized protein; Belongs to the RNR ribonuclease family.	0.509
PV09_01507	PV09_00396	A0A0D2ALC0	A0A0D2ASS5	CCHC-type domain-containing protein.	RNase_PH domain-containing protein.	0.555
PV09_01507	PV09_00977	A0A0D2ALC0	A0A0D2AMW6	CCHC-type domain-containing protein.	Uncharacterized protein.	0.940
PV09_01507	PV09_01813	A0A0D2ALC0	A0A0D2AMC9	CCHC-type domain-containing protein.	Uncharacterized protein.	0.551
PV09_01507	PV09_02292	A0A0D2ALC0	A0A0D2AI88	CCHC-type domain-containing protein.	Uncharacterized protein; Belongs to the RNR ribonuclease family.	0.490
PV09_01507	PV09_05134	A0A0D2ALC0	A0A0D2AB60	CCHC-type domain-containing protein.	Uncharacterized protein.	0.537
PV09_01507	PV09_05179	A0A0D2ALC0	A0A0D1XMT2	CCHC-type domain-containing protein.	RNase_PH domain-containing protein.	0.480

page 1 of 6

Server load: low (16%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About