41 items (Verruconis gallopava) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV09_07790	OBG-type G domain-containing protein. (368 aa)
	PV09_01381	Uncharacterized protein. (200 aa)
	PV09_01809	Uncharacterized protein. (202 aa)
	PV09_02440	ADP-ribosylation factor, variant; Belongs to the small GTPase superfamily. Arf family. (183 aa)
	PV09_04141	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (181 aa)
	PV09_04563	Tr-type G domain-containing protein. (568 aa)
	PV09_04734	Tr-type G domain-containing protein. (986 aa)
	PV09_00854	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (217 aa)
	PV09_00815	Translation initiation factor aIF-2. (1103 aa)
	PV09_01310	GTP-binding protein ypt2. (206 aa)
	PV09_01069	ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family. (181 aa)
	PV09_01654	Uncharacterized protein. (200 aa)
	PV09_02933	Uncharacterized protein. (234 aa)
	PV09_05173	Uncharacterized protein. (205 aa)
	PV09_05940	Uncharacterized protein. (228 aa)
	PV09_05626	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (182 aa)
	PV09_06167	Elongation factor 2. (840 aa)
	PV09_06665	Ras-like protein. (210 aa)
	PV09_08102	Translation initiation factor IF-2. (982 aa)
	PV09_08787	GTP-binding protein ryh1. (207 aa)
	PV09_00806	Uncharacterized protein. (320 aa)
	PV09_00943	Uncharacterized protein. (340 aa)
	PV09_04797	Small COPII coat GTPase sar1; Belongs to the small GTPase superfamily. SAR1 family. (189 aa)
	PV09_07952	Uncharacterized protein. (301 aa)
	PV09_08449	Uncharacterized protein. (212 aa)
	PV09_09156	GTP-binding protein ypt1. (201 aa)
	PV09_09783	tRNA modification GTPase TrmE. (576 aa)
	PV09_00272	Uncharacterized protein. (188 aa)
	GUF1	Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (677 aa)
	PV09_02116	GTP-binding protein ypt5. (220 aa)
	MEF1	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (795 aa)
	PV09_02664	Ribosome-interacting GTPase 1. (367 aa)
	PV09_03420	Protein Ras-2, variant. (244 aa)
	PV09_03924	GTP-binding protein rhoA, variant. (197 aa)
	PV09_04253	Uncharacterized protein. (225 aa)
	PV09_05116	Tr-type G domain-containing protein. (1108 aa)
	PV09_05341	ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. (183 aa)
	MEF2	Ribosome-releasing factor 2, mitochondrial; Mitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. Not involved in the GTP-dependent ribosomal translocation step during translation elongation; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. (923 aa)
	PV09_08885	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (453 aa)
	PV09_08857	Septum-promoting GTP-binding protein 1. (335 aa)
	PV09_09672	Uncharacterized protein. (273 aa)

Your Current Organism:

Verruconis gallopava

NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GUF1	PV09_08102	A0A0D1Y0L6	A0A0D2A146	Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.	Translation initiation factor IF-2.	0.412
MEF1	PV09_00815	A0A0D1XWS2	A0A0D2AQF6	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	Translation initiation factor aIF-2.	0.748
MEF1	PV09_08102	A0A0D1XWS2	A0A0D2A146	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	Translation initiation factor IF-2.	0.737
MEF1	PV09_08885	A0A0D1XWS2	A0A0D1XB65	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.935
MEF2	PV09_00815	A0A0D1XJD9	A0A0D2AQF6	Ribosome-releasing factor 2, mitochondrial; Mitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. Not involved in the GTP-dependent ribosomal translocation step during translation elongation; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.	Translation initiation factor aIF-2.	0.748
MEF2	PV09_08102	A0A0D1XJD9	A0A0D2A146	Ribosome-releasing factor 2, mitochondrial; Mitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. Not involved in the GTP-dependent ribosomal translocation step during translation elongation; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.	Translation initiation factor IF-2.	0.796
MEF2	PV09_08885	A0A0D1XJD9	A0A0D1XB65	Ribosome-releasing factor 2, mitochondrial; Mitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. Not involved in the GTP-dependent ribosomal translocation step during translation elongation; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.935
PV09_00272	PV09_00943	A0A0D1Y2W3	A0A0D1Z4X6	Uncharacterized protein.	Uncharacterized protein.	0.535
PV09_00272	PV09_01310	A0A0D1Y2W3	A0A0D2ANX9	Uncharacterized protein.	GTP-binding protein ypt2.	0.601
PV09_00272	PV09_01381	A0A0D1Y2W3	A0A0D2BB42	Uncharacterized protein.	Uncharacterized protein.	0.563
PV09_00272	PV09_01654	A0A0D1Y2W3	A0A0D2ALS8	Uncharacterized protein.	Uncharacterized protein.	0.582
PV09_00272	PV09_01809	A0A0D1Y2W3	A0A0D2B9I6	Uncharacterized protein.	Uncharacterized protein.	0.563
PV09_00272	PV09_02116	A0A0D1Y2W3	A0A0D1XWT1	Uncharacterized protein.	GTP-binding protein ypt5.	0.540
PV09_00272	PV09_02933	A0A0D1Y2W3	A0A0D2AI17	Uncharacterized protein.	Uncharacterized protein.	0.546
PV09_00272	PV09_03924	A0A0D1Y2W3	A0A0D1XRU5	Uncharacterized protein.	GTP-binding protein rhoA, variant.	0.563
PV09_00272	PV09_04141	A0A0D1Y2W3	A0A0D2B0X9	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.554
PV09_00272	PV09_05173	A0A0D1Y2W3	A0A0D2AAS1	Uncharacterized protein.	Uncharacterized protein.	0.583
PV09_00272	PV09_07952	A0A0D1Y2W3	A0A0D1YHT6	Uncharacterized protein.	Uncharacterized protein.	0.563
PV09_00272	PV09_08787	A0A0D1Y2W3	A0A0D1ZYW2	Uncharacterized protein.	GTP-binding protein ryh1.	0.651
PV09_00272	PV09_09156	A0A0D1Y2W3	A0A0D1YEH7	Uncharacterized protein.	GTP-binding protein ypt1.	0.604

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