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PV09_03620 PV09_03620 FEN1 FEN1 PV09_05929 PV09_05929 PV09_06755 PV09_06755 PV09_02467 PV09_02467 PV09_02983 PV09_02983 PV09_03601 PV09_03601 PV09_03811 PV09_03811 PV09_05274 PV09_05274 PV09_05663 PV09_05663 PV09_05615 PV09_05615 PV09_06297 PV09_06297 PV09_06120 PV09_06120 MCM7 MCM7 PV09_07446 PV09_07446 PV09_07490 PV09_07490 PV09_07603 PV09_07603 PV09_09441 PV09_09441 PV09_00835 PV09_00835 PV09_02131 PV09_02131 PV09_02608 PV09_02608 PV09_03713 PV09_03713 PV09_05660 PV09_05660 PV09_01416 PV09_01416 PV09_01740 PV09_01740 PV09_05048 PV09_05048 PV09_05359 PV09_05359
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV09_03620DNA primase; Belongs to the eukaryotic-type primase small subunit family. (483 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (395 aa)
PV09_05929DNA ligase. (875 aa)
PV09_06755DNA helicase; Belongs to the MCM family. (946 aa)
PV09_02467DNA ligase. (946 aa)
PV09_02983DNA replication complex GINS protein PSF1. (229 aa)
PV09_03601DNA helicase; Belongs to the MCM family. (847 aa)
PV09_03811Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (909 aa)
PV09_05274DNA ligase. (1005 aa)
PV09_05663Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (611 aa)
PV09_05615DNA helicase; Belongs to the MCM family. (982 aa)
PV09_06297Sld5 domain-containing protein. (184 aa)
PV09_06120DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (497 aa)
MCM7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (798 aa)
PV09_07446Replication factor C subunit 1. (1068 aa)
PV09_07490Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (259 aa)
PV09_07603DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2251 aa)
PV09_09441DNA helicase; Belongs to the MCM family. (875 aa)
PV09_00835FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (558 aa)
PV09_02131DNA helicase; Belongs to the MCM family. (743 aa)
PV09_02608Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (760 aa)
PV09_03713DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family. (235 aa)
PV09_05660DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (217 aa)
PV09_01416DNA polymerase. (1469 aa)
PV09_01740DNA polymerase. (1701 aa)
PV09_05048DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (653 aa)
PV09_05359DNA polymerase. (1100 aa)
Your Current Organism:
Verruconis gallopava
NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014
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