22 items (Verruconis gallopava) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	PV09_00059	SMC_N domain-containing protein. (1139 aa)
	PV09_05158	SCD domain-containing protein. (1203 aa)
	PV09_03571	Uncharacterized protein. (571 aa)
	PV09_09802	Uncharacterized protein. (327 aa)
	PV09_09493	Helicase C-terminal domain-containing protein. (252 aa)
	PV09_05853	SMC_N domain-containing protein. (1164 aa)
	PV09_04691	Uncharacterized protein. (1081 aa)
	PV09_04455	Structural maintenance of chromosomes protein. (1216 aa)
	PV09_09815	Uncharacterized protein. (1524 aa)
	PV09_08940	Uncharacterized protein. (240 aa)
	PV09_05663	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (611 aa)
	PV09_03669	Uncharacterized protein. (567 aa)
	PV09_03921	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	PV09_08512	Uncharacterized protein. (1629 aa)
	PV09_07833	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (472 aa)
	PV09_01276	RING-type domain-containing protein. (327 aa)
	PV09_05611	Ubiquitin-like domain-containing protein. (94 aa)
	PV09_04585	SP-RING-type domain-containing protein. (433 aa)
	PV09_03093	Uncharacterized protein. (1031 aa)
	PV09_00823	Structural maintenance of chromosomes protein. (1263 aa)
	PV09_07293	MAGE domain-containing protein. (356 aa)
	PV09_09618	UDG domain-containing protein. (291 aa)

Your Current Organism:

Verruconis gallopava

NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV09_00059	PV09_00823	A0A0D2ARI6	A0A0D2BC08	SMC_N domain-containing protein.	Structural maintenance of chromosomes protein.	0.812
PV09_00059	PV09_01276	A0A0D2ARI6	A0A0D2AP80	SMC_N domain-containing protein.	RING-type domain-containing protein.	0.999
PV09_00059	PV09_03571	A0A0D2ARI6	A0A0D1XSH7	SMC_N domain-containing protein.	Uncharacterized protein.	0.935
PV09_00059	PV09_03669	A0A0D2ARI6	A0A0D2ADP7	SMC_N domain-containing protein.	Uncharacterized protein.	0.655
PV09_00059	PV09_03921	A0A0D2ARI6	A0A0D2AEI7	SMC_N domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.862
PV09_00059	PV09_04455	A0A0D2ARI6	A0A0D1YVI9	SMC_N domain-containing protein.	Structural maintenance of chromosomes protein.	0.903
PV09_00059	PV09_04585	A0A0D2ARI6	A0A0D2AYN8	SMC_N domain-containing protein.	SP-RING-type domain-containing protein.	0.999
PV09_00059	PV09_05158	A0A0D2ARI6	A0A0D1XMR7	SMC_N domain-containing protein.	SCD domain-containing protein.	0.927
PV09_00059	PV09_05611	A0A0D2ARI6	A0A0D1XLW6	SMC_N domain-containing protein.	Ubiquitin-like domain-containing protein.	0.932
PV09_00059	PV09_05663	A0A0D2ARI6	A0A0D2A8Z7	SMC_N domain-containing protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.481
PV09_00059	PV09_05853	A0A0D2ARI6	A0A0D1YQA4	SMC_N domain-containing protein.	SMC_N domain-containing protein.	0.999
PV09_00059	PV09_07293	A0A0D2ARI6	A0A0D1XGC4	SMC_N domain-containing protein.	MAGE domain-containing protein.	0.999
PV09_00059	PV09_07833	A0A0D2ARI6	A0A0D2AND7	SMC_N domain-containing protein.	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	0.999
PV09_00059	PV09_08512	A0A0D2ARI6	A0A0D2AL92	SMC_N domain-containing protein.	Uncharacterized protein.	0.510
PV09_00059	PV09_09493	A0A0D2ARI6	A0A0D1YDD2	SMC_N domain-containing protein.	Helicase C-terminal domain-containing protein.	0.510
PV09_00059	PV09_09802	A0A0D2ARI6	A0A0D1YCE5	SMC_N domain-containing protein.	Uncharacterized protein.	0.510
PV09_00059	PV09_09815	A0A0D2ARI6	A0A0D1ZWD6	SMC_N domain-containing protein.	Uncharacterized protein.	0.510
PV09_00823	PV09_00059	A0A0D2BC08	A0A0D2ARI6	Structural maintenance of chromosomes protein.	SMC_N domain-containing protein.	0.812
PV09_00823	PV09_01276	A0A0D2BC08	A0A0D2AP80	Structural maintenance of chromosomes protein.	RING-type domain-containing protein.	0.889
PV09_00823	PV09_03571	A0A0D2BC08	A0A0D1XSH7	Structural maintenance of chromosomes protein.	Uncharacterized protein.	0.999

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