STRINGSTRING
PV09_03620 PV09_03620 PV09_09860 PV09_09860 PV09_09688 PV09_09688 PV09_09482 PV09_09482 PV09_05359 PV09_05359 PV09_05048 PV09_05048 PV09_01416 PV09_01416 PV09_09418 PV09_09418 PV09_09692 PV09_09692 PV09_09267 PV09_09267 PV09_09546 PV09_09546 PV09_08904 PV09_08904 PV09_08216 PV09_08216 PV09_07490 PV09_07490 PV09_07188 PV09_07188 PV09_07446 PV09_07446 PV09_06754 PV09_06754 PV09_06120 PV09_06120 PV09_05663 PV09_05663 PV09_04568 PV09_04568 PV09_03633 PV09_03633 PV09_02749 PV09_02749 PV09_09478 PV09_09478 PV09_02755 PV09_02755 PV09_09563 PV09_09563 PV09_02379 PV09_02379 PV09_02467 PV09_02467 PV09_01570 PV09_01570 PV09_01639 PV09_01639 PV09_01751 PV09_01751 PV09_07578 PV09_07578 PV09_06655 PV09_06655 PV09_00450 PV09_00450 PV09_05929 PV09_05929 PV09_05520 PV09_05520 FEN1 FEN1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV09_03620DNA primase; Belongs to the eukaryotic-type primase small subunit family. (483 aa)
PV09_09860Uncharacterized protein. (110 aa)
PV09_09688Uncharacterized protein. (571 aa)
PV09_09482Uncharacterized protein. (104 aa)
PV09_05359DNA polymerase. (1100 aa)
PV09_05048DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (653 aa)
PV09_01416DNA polymerase. (1469 aa)
PV09_09418Uncharacterized protein. (214 aa)
PV09_09692Uncharacterized protein. (279 aa)
PV09_09267Uncharacterized protein. (779 aa)
PV09_09546Uncharacterized protein. (421 aa)
PV09_08904AAA domain-containing protein. (1205 aa)
PV09_08216Uncharacterized protein. (108 aa)
PV09_07490Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (259 aa)
PV09_07188Uncharacterized protein. (486 aa)
PV09_07446Replication factor C subunit 1. (1068 aa)
PV09_06754Uncharacterized protein. (201 aa)
PV09_06120DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (497 aa)
PV09_05663Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (611 aa)
PV09_04568Zds_C domain-containing protein. (1059 aa)
PV09_03633Uncharacterized protein. (541 aa)
PV09_02749Uncharacterized protein. (144 aa)
PV09_09478Uncharacterized protein. (309 aa)
PV09_02755Replication factor C subunit 5. (352 aa)
PV09_09563Replication factor C subunit 4. (348 aa)
PV09_02379Uncharacterized protein. (1683 aa)
PV09_02467DNA ligase. (946 aa)
PV09_01570Uncharacterized protein. (430 aa)
PV09_01639Vezatin domain-containing protein. (672 aa)
PV09_01751AAA domain-containing protein. (391 aa)
PV09_07578CCHC-type domain-containing protein. (219 aa)
PV09_06655Uncharacterized protein. (449 aa)
PV09_00450AAA domain-containing protein. (396 aa)
PV09_05929DNA ligase. (875 aa)
PV09_05520Uncharacterized protein. (340 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (395 aa)
Your Current Organism:
Verruconis gallopava
NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014
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