(92 nodes) Lysine degradation network (Verruconis gallopava)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV09_02136	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (557 aa)
	PV09_09420	Aldedh domain-containing protein. (497 aa)
	PV09_08909	Homoserine O-acetyltransferase. (557 aa)
	PV09_08451	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily. (905 aa)
	PV09_08489	Uncharacterized protein. (177 aa)
	PV09_08265	Aldedh domain-containing protein. (487 aa)
	PV09_07924	Uncharacterized protein. (446 aa)
	PV09_07802	SET domain-containing protein. (717 aa)
	PV09_06834	Trimethyllysine dioxygenase. (477 aa)
	PV09_06565	SET domain-containing protein. (361 aa)
	PV09_06026	Aldedh domain-containing protein. (503 aa)
	PV09_05775	Uncharacterized protein. (437 aa)
	PV09_05750	Zn(2)-C6 fungal-type domain-containing protein. (752 aa)
	PV09_04735	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (397 aa)
	PV09_04649	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (509 aa)
	PV09_04358	PHD domain-containing protein. (636 aa)
	PV09_03339	Uncharacterized protein. (319 aa)
	PV09_03406	Uncharacterized protein. (429 aa)
	PV09_03521	SET domain-containing protein. (202 aa)
	PV09_09340	Uncharacterized protein. (508 aa)
	PV09_09024	Zn(2)-C6 fungal-type domain-containing protein. (715 aa)
	PV09_02575	Uncharacterized protein. (421 aa)
	PV09_02168	Uncharacterized protein. (372 aa)
	PV09_02222	Uncharacterized protein. (1062 aa)
	PV09_02066	Aldedh domain-containing protein. (511 aa)
	PV09_02129	Uncharacterized protein. (405 aa)
	PV09_08335	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (513 aa)
	PV09_01508	Uncharacterized protein. (871 aa)
	PV09_07679	Lipoyl-binding domain-containing protein. (431 aa)
	PV09_01418	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (486 aa)
	PV09_07282	Uncharacterized protein. (1000 aa)
	PV09_06839	Zn(2)-C6 fungal-type domain-containing protein. (736 aa)
	PV09_05064	Uncharacterized protein. (780 aa)
	PV09_04016	PHD domain-containing protein. (762 aa)
	PV09_03348	Dihydrolipoyl dehydrogenase. (508 aa)
	PV09_03154	DAO domain-containing protein. (439 aa)
	PV09_09785	Aldedh domain-containing protein. (123 aa)
	PV09_08845	Uncharacterized protein. (432 aa)
	PV09_07848	Uncharacterized protein. (1327 aa)
	PV09_07687	SET domain-containing protein. (317 aa)
	PV09_07362	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (274 aa)
	PV09_05838	Uncharacterized protein. (491 aa)
	PV09_05642	Uncharacterized protein. (1087 aa)
	PV09_05413	Saccharopine dehydrogenase [NAD(+), L-lysine-forming]; Belongs to the AlaDH/PNT family. (395 aa)
	PV09_05263	SET domain-containing protein. (326 aa)
	PV09_04997	Uncharacterized protein. (538 aa)
	PV09_05035	Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones. (543 aa)
	PV09_04837	Mercuric reductase. (501 aa)
	PV09_04934	Zn(2)-C6 fungal-type domain-containing protein. (901 aa)
	PV09_04963	Uncharacterized protein. (533 aa)
	PV09_04551	Zn(2)-C6 fungal-type domain-containing protein. (675 aa)
	PV09_04216	Uncharacterized protein. (355 aa)
	PV09_03722	MHYT domain-containing protein. (824 aa)
	PV09_03398	Uncharacterized protein. (759 aa)
	PV09_02644	SET domain-containing protein. (333 aa)
	PV09_01489	Uncharacterized protein. (472 aa)
	PV09_00952	Uncharacterized protein. (820 aa)
	PV09_00709	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (478 aa)
	PV09_00880	Uncharacterized protein. (249 aa)
	PV09_00158	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (487 aa)
	PV09_09371	DAO domain-containing protein. (386 aa)
	PV09_08959	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (505 aa)
	PV09_08887	SET domain-containing protein. (611 aa)
	PV09_08283	Uncharacterized protein. (195 aa)
	PV09_07935	Isochorismatase domain-containing protein. (190 aa)
	PV09_06184	Uncharacterized protein. (415 aa)
	PV09_06017	Uncharacterized protein. (293 aa)
	PV09_06145	Zn(2)-C6 fungal-type domain-containing protein. (765 aa)
	PV09_06161	Uncharacterized protein. (369 aa)
	PV09_05875	TauD domain-containing protein. (409 aa)
	PV09_05240	Uncharacterized protein. (449 aa)
	PV09_04272	AB hydrolase-1 domain-containing protein. (552 aa)
	PV09_04034	Aldedh domain-containing protein. (497 aa)
	PV09_03837	Fungal_trans domain-containing protein. (622 aa)
	PV09_03478	Uncharacterized protein. (491 aa)
	PV09_03589	SET domain-containing protein. (457 aa)
	PV09_03023	SET domain-containing protein. (1069 aa)
	PV09_02621	Protein kinase domain-containing protein. (954 aa)
	PV09_01467	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (434 aa)
	PV09_01891	MYND-type domain-containing protein. (366 aa)
	PV09_01313	DAO domain-containing protein. (478 aa)
	PV09_00665	Fibronectin type-III domain-containing protein. (1175 aa)
	PV09_09834	DAO domain-containing protein. (387 aa)
	PV09_09413	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (497 aa)
	PV09_09602	Zn(2)-C6 fungal-type domain-containing protein. (766 aa)
	PV09_09536	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (488 aa)
	PV09_09144	Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation. (1217 aa)
	PV09_02128	Uncharacterized protein. (607 aa)
	PV09_02183	Succinate-semialdehyde dehydrogenase. (532 aa)
	PV09_00788	Uncharacterized protein. (967 aa)
	PV09_00146	SET domain-containing protein. (469 aa)
	PV09_00432	SET domain-containing protein. (368 aa)

Your Current Organism:

Verruconis gallopava

NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV09_00146	PV09_00788	A0A0D2BCT1	A0A0D2BBW0	SET domain-containing protein.	Uncharacterized protein.	0.532
PV09_00146	PV09_01508	A0A0D2BCT1	A0A0D2AM69	SET domain-containing protein.	Uncharacterized protein.	0.463
PV09_00146	PV09_02222	A0A0D2BCT1	A0A0D2AKK8	SET domain-containing protein.	Uncharacterized protein.	0.454
PV09_00146	PV09_03023	A0A0D2BCT1	A0A0D1YYN8	SET domain-containing protein.	SET domain-containing protein.	0.627
PV09_00146	PV09_04016	A0A0D2BCT1	A0A0D2B0C9	SET domain-containing protein.	PHD domain-containing protein.	0.400
PV09_00146	PV09_04216	A0A0D2BCT1	A0A0D1XQX6	SET domain-containing protein.	Uncharacterized protein.	0.400
PV09_00146	PV09_04358	A0A0D2BCT1	A0A0D2ADR4	SET domain-containing protein.	PHD domain-containing protein.	0.400
PV09_00146	PV09_05035	A0A0D2BCT1	A0A0D1XMI6	SET domain-containing protein.	Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones.	0.629
PV09_00146	PV09_07802	A0A0D2BCT1	A0A0D2A2M1	SET domain-containing protein.	SET domain-containing protein.	0.461
PV09_00146	PV09_08451	A0A0D2BCT1	A0A0D2A0V6	SET domain-containing protein.	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.	0.509
PV09_00146	PV09_08887	A0A0D2BCT1	A0A0D1YFD3	SET domain-containing protein.	SET domain-containing protein.	0.493
PV09_00146	PV09_09144	A0A0D2BCT1	A0A0D1ZXK7	SET domain-containing protein.	Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.	0.632
PV09_00146	PV09_09340	A0A0D2BCT1	A0A0D2AIY1	SET domain-containing protein.	Uncharacterized protein.	0.475
PV09_00158	PV09_01489	A0A0D1Y2E9	A0A0D1XXQ6	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.	Uncharacterized protein.	0.524
PV09_00158	PV09_03339	A0A0D1Y2E9	A0A0D2AG25	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.	Uncharacterized protein.	0.490
PV09_00432	PV09_00788	A0A0D2BDU6	A0A0D2BBW0	SET domain-containing protein.	Uncharacterized protein.	0.532
PV09_00432	PV09_01508	A0A0D2BDU6	A0A0D2AM69	SET domain-containing protein.	Uncharacterized protein.	0.789
PV09_00432	PV09_02222	A0A0D2BDU6	A0A0D2AKK8	SET domain-containing protein.	Uncharacterized protein.	0.635
PV09_00432	PV09_03023	A0A0D2BDU6	A0A0D1YYN8	SET domain-containing protein.	SET domain-containing protein.	0.682
PV09_00432	PV09_04016	A0A0D2BDU6	A0A0D2B0C9	SET domain-containing protein.	PHD domain-containing protein.	0.400

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