STRINGSTRING
PV09_00445 PV09_00445 PV09_05154 PV09_05154 PV09_05116 PV09_05116 PV09_05813 PV09_05813 PV09_08596 PV09_08596 TIF6 TIF6 PV09_06115 PV09_06115 PV09_06931 PV09_06931 PV09_07217 PV09_07217 PV09_06996 PV09_06996 PV09_07647 PV09_07647 PV09_07605 PV09_07605 PV09_07479 PV09_07479 PV09_08160 PV09_08160 PV09_08570 PV09_08570 PV09_09575 PV09_09575 PV09_00108 PV09_00108 PV09_01763 PV09_01763 PV09_02507 PV09_02507 PV09_02461 PV09_02461 PV09_02739 PV09_02739 PV09_02703 PV09_02703 PV09_03033 PV09_03033 PV09_04019 PV09_04019 PV09_04627 PV09_04627 PV09_04483 PV09_04483 PV09_05192 PV09_05192 PV09_05544 PV09_05544 PV09_05497 PV09_05497 PV09_06212 PV09_06212 PV09_07628 PV09_07628 PV09_08687 PV09_08687 PV09_08749 PV09_08749 PV09_00409 PV09_00409 PV09_00369 PV09_00369 PV09_01034 PV09_01034 PV09_01845 PV09_01845 PV09_02143 PV09_02143 PV09_03622 PV09_03622 PV09_03593 PV09_03593 PV09_04368 PV09_04368 PV09_04509 PV09_04509 PV09_05901 PV09_05901 PV09_05922 PV09_05922 PV09_05442 PV09_05442 PV09_04812 PV09_04812 PV09_05421 PV09_05421 PV09_05563 PV09_05563 PV09_04994 PV09_04994 PV09_04823 PV09_04823 PV09_03714 PV09_03714 PV09_03756 PV09_03756 PV09_04060 PV09_04060 PV09_02714 PV09_02714 PV09_02549 PV09_02549 PV09_02458 PV09_02458 PV09_09149 PV09_09149 PV09_02027 PV09_02027 PV09_08913 PV09_08913 PV09_01990 PV09_01990 PV09_02139 PV09_02139 PV09_02150 PV09_02150 PV09_02160 PV09_02160 PV09_01438 PV09_01438 PV09_08215 PV09_08215 PV09_01762 PV09_01762 PV09_08015 PV09_08015 PV09_01824 PV09_01824 PV09_08019 PV09_08019 PV09_01415 PV09_01415 PV09_00720 PV09_00720 PV09_00854 PV09_00854 PV09_06830 PV09_06830 PV09_00172 PV09_00172 PV09_06660 PV09_06660 PV09_06561 PV09_06561 PV09_06410 PV09_06410 PV09_06424 PV09_06424 PV09_05037 PV09_05037 PV09_04122 PV09_04122 PV09_03574 PV09_03574 PV09_02713 PV09_02713 PV09_02384 PV09_02384 PV09_02460 PV09_02460 PV09_02642 PV09_02642 PV09_01525 PV09_01525 NAT10 NAT10 PV09_00034 PV09_00034 PV09_00177 PV09_00177 PV09_04879 PV09_04879
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV09_00445RAI1 domain-containing protein. (380 aa)
PV09_05154tRNA pseudouridine(55) synthase. (448 aa)
PV09_05116Tr-type G domain-containing protein. (1108 aa)
PV09_05813Nop domain-containing protein. (509 aa)
PV09_08596Uncharacterized protein. (752 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (246 aa)
PV09_06115Nop domain-containing protein. (574 aa)
PV09_06931Fcf2 domain-containing protein. (242 aa)
PV09_07217Uncharacterized protein. (686 aa)
PV09_06996Uncharacterized protein. (982 aa)
PV09_07647U3 small nucleolar RNA-associated protein 22. (1180 aa)
PV09_07605Uncharacterized protein. (285 aa)
PV09_07479Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (366 aa)
PV09_08160Brix domain-containing protein. (295 aa)
PV09_08570WD_REPEATS_REGION domain-containing protein. (1062 aa)
PV09_09575Uncharacterized protein. (167 aa)
PV09_00108Uncharacterized protein. (871 aa)
PV09_01763Uncharacterized protein. (312 aa)
PV09_02507CP-type G domain-containing protein. (531 aa)
PV09_02461Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (365 aa)
PV09_02739Kri1_C domain-containing protein. (610 aa)
PV09_02703GAR domain-containing protein. (969 aa)
PV09_03033Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (659 aa)
PV09_04019SBDS family rRNA metabolism protein. (309 aa)
PV09_04627Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
PV09_04483Uncharacterized protein. (538 aa)
PV09_05192Exonuclease domain-containing protein. (680 aa)
PV09_05544Spindle pole body component. (775 aa)
PV09_05497NTF2 domain-containing protein. (187 aa)
PV09_06212Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4831 aa)
PV09_07628H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (210 aa)
PV09_08687Centromere/microtubule-binding protein cbf5. (479 aa)
PV09_08749RIO domain-containing protein. (450 aa)
PV09_00409Uncharacterized protein. (564 aa)
PV09_00369Uncharacterized protein. (268 aa)
PV09_01034Uncharacterized protein. (1040 aa)
PV09_01845Exonuclease domain-containing protein. (735 aa)
PV09_0214320S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (443 aa)
PV09_03622C2H2-type domain-containing protein. (389 aa)
PV09_03593Uncharacterized protein. (586 aa)
PV09_04368RIO domain-containing protein. (478 aa)
PV09_04509RNase III domain-containing protein. (334 aa)
PV09_05901Uncharacterized protein. (453 aa)
PV09_05922Uncharacterized protein. (278 aa)
PV09_05442WD_REPEATS_REGION domain-containing protein. (954 aa)
PV09_04812WD_REPEATS_REGION domain-containing protein. (948 aa)
PV09_0542160S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (515 aa)
PV09_05563Uncharacterized protein. (307 aa)
PV09_04994Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (234 aa)
PV09_04823WD_REPEATS_REGION domain-containing protein. (543 aa)
PV09_03714Importin N-terminal domain-containing protein. (1075 aa)
PV09_03756U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (726 aa)
PV09_04060BP28CT domain-containing protein. (1806 aa)
PV09_02714Utp12 domain-containing protein. (441 aa)
PV09_02549Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (308 aa)
PV09_02458Uncharacterized protein. (210 aa)
PV09_09149Uncharacterized protein. (748 aa)
PV09_020275'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1466 aa)
PV09_08913Uncharacterized protein. (942 aa)
PV09_01990Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (635 aa)
PV09_02139H/ACA ribonucleoprotein complex subunit 3. (66 aa)
PV09_02150Uncharacterized protein. (916 aa)
PV09_02160WD_REPEATS_REGION domain-containing protein. (887 aa)
PV09_01438Uncharacterized protein. (597 aa)
PV09_08215DUF4604 domain-containing protein. (186 aa)
PV09_01762Casein kinase II subunit alpha; Belongs to the protein kinase superfamily. (333 aa)
PV09_08015Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family. (182 aa)
PV09_0182418S rRNA biogenesis protein RCL1. (404 aa)
PV09_08019Ribonuclease P protein subunit. (246 aa)
PV09_01415Exonuclease domain-containing protein. (192 aa)
PV09_00720Bms1-type G domain-containing protein. (1180 aa)
PV09_00854GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (217 aa)
PV09_06830Uncharacterized protein. (741 aa)
PV09_00172Uncharacterized protein. (267 aa)
PV09_06660Uncharacterized protein. (126 aa)
PV09_06561Uncharacterized protein. (223 aa)
PV09_06410Uncharacterized protein. (331 aa)
PV09_06424Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (382 aa)
PV09_05037Uncharacterized protein. (534 aa)
PV09_04122rRNA 2'-O-methyltransferase fibrillarin. (319 aa)
PV09_03574S4 RNA-binding domain-containing protein. (187 aa)
PV09_02713Uncharacterized protein. (879 aa)
PV09_02384Uncharacterized protein. (345 aa)
PV09_02460Zn(2)-C6 fungal-type domain-containing protein. (728 aa)
PV09_02642F-box domain-containing protein. (512 aa)
PV09_015255'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (1032 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1056 aa)
PV09_00034CP-type G domain-containing protein. (675 aa)
PV09_00177Adenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity. May be involved in rRNA maturation and transcription regulation. (182 aa)
PV09_04879Uncharacterized protein. (205 aa)
Your Current Organism:
Verruconis gallopava
NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014
Server load: low (24%) [HD]