66 items (Verruconis gallopava) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV09_09418	Uncharacterized protein. (214 aa)
	PV09_00200	E3 ubiquitin-protein ligase RBX1. (117 aa)
	PV09_00901	Uncharacterized protein. (199 aa)
	PV09_02019	Uncharacterized protein. (1258 aa)
	PV09_03093	Uncharacterized protein. (1031 aa)
	PV09_05520	Uncharacterized protein. (340 aa)
	PV09_05929	DNA ligase. (875 aa)
	PV09_00459	ERCC4 domain-containing protein. (939 aa)
	PV09_00450	AAA domain-containing protein. (396 aa)
	PV09_06655	Uncharacterized protein. (449 aa)
	PV09_00140	DNA repair protein. (370 aa)
	PV09_07578	CCHC-type domain-containing protein. (219 aa)
	PV09_01751	AAA domain-containing protein. (391 aa)
	PV09_01639	Vezatin domain-containing protein. (672 aa)
	PV09_01570	Uncharacterized protein. (430 aa)
	PV09_01895	Uncharacterized protein. (864 aa)
	PV09_02573	CBFD_NFYB_HMF domain-containing protein. (265 aa)
	PV09_02483	Uncharacterized protein. (377 aa)
	PV09_02467	DNA ligase. (946 aa)
	PV09_09563	Replication factor C subunit 4. (348 aa)
	PV09_02755	Replication factor C subunit 5. (352 aa)
	PV09_02973	Uncharacterized protein. (373 aa)
	PV09_09478	Uncharacterized protein. (309 aa)
	PV09_02749	Uncharacterized protein. (144 aa)
	PV09_03633	Uncharacterized protein. (541 aa)
	PV09_03431	Helicase ATP-binding domain-containing protein. (878 aa)
	PV09_04568	Zds_C domain-containing protein. (1059 aa)
	PV09_04560	CDK-activating kinase assembly factor MAT1. (344 aa)
	PV09_05663	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (611 aa)
	PV09_05438	WD_REPEATS_REGION domain-containing protein. (464 aa)
	PV09_06887	HMG box domain-containing protein. (483 aa)
	PV09_06754	Uncharacterized protein. (201 aa)
	PV09_06671	CPSF_A domain-containing protein. (1136 aa)
	PV09_06874	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (409 aa)
	PV09_07138	Uncharacterized protein. (308 aa)
	PV09_07446	Replication factor C subunit 1. (1068 aa)
	PV09_07188	Uncharacterized protein. (486 aa)
	PV09_07490	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (259 aa)
	PV09_07603	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2251 aa)
	PV09_08216	Uncharacterized protein. (108 aa)
	PV09_08805	Uncharacterized protein. (72 aa)
	PV09_08904	AAA domain-containing protein. (1205 aa)
	PV09_08578	Uncharacterized protein. (1236 aa)
	PV09_09546	Uncharacterized protein. (421 aa)
	PV09_09267	Uncharacterized protein. (779 aa)
	PV09_09308	UV excision repair protein Rad23. (373 aa)
	PV09_09692	Uncharacterized protein. (279 aa)
	PV09_01355	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (471 aa)
	PV09_01902	Uncharacterized protein. (996 aa)
	PV09_03545	DNA_pol_E_B domain-containing protein. (762 aa)
	PV09_04691	Uncharacterized protein. (1081 aa)
	PV09_05752	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (521 aa)
	PV09_06230	PH_TFIIH domain-containing protein. (623 aa)
	PV09_08414	CULLIN_2 domain-containing protein; Belongs to the cullin family. (818 aa)
	PV09_08701	Uncharacterized protein. (399 aa)
	PV09_02526	Uncharacterized protein. (264 aa)
	PV09_02454	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (164 aa)
	PV09_03482	DNA repair helicase rad15. (796 aa)
	PV09_05359	DNA polymerase. (1100 aa)
	PV09_05453	CBFD_NFYB_HMF domain-containing protein. (236 aa)
	PV09_07737	Uncharacterized protein. (1110 aa)
	PV09_08473	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (477 aa)
	PV09_09354	HMG box domain-containing protein. (321 aa)
	PV09_09482	Uncharacterized protein. (104 aa)
	PV09_09688	Uncharacterized protein. (571 aa)
	PV09_09860	Uncharacterized protein. (110 aa)

Your Current Organism:

Verruconis gallopava

NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV09_00140	PV09_00200	A0A0D2AR76	A0A0D2BCX1	DNA repair protein.	E3 ubiquitin-protein ligase RBX1.	0.728
PV09_00140	PV09_00450	A0A0D2AR76	A0A0D2ASA5	DNA repair protein.	AAA domain-containing protein.	0.684
PV09_00140	PV09_00459	A0A0D2AR76	A0A0D2ASB6	DNA repair protein.	ERCC4 domain-containing protein.	0.986
PV09_00140	PV09_01355	A0A0D2AR76	A0A0D1Z679	DNA repair protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.930
PV09_00140	PV09_01639	A0A0D2AR76	A0A0D2ALQ5	DNA repair protein.	Vezatin domain-containing protein.	0.704
PV09_00140	PV09_01751	A0A0D2AR76	A0A0D2AM34	DNA repair protein.	AAA domain-containing protein.	0.688
PV09_00140	PV09_01895	A0A0D2AR76	A0A0D2AKD4	DNA repair protein.	Uncharacterized protein.	0.980
PV09_00140	PV09_02019	A0A0D2AR76	A0A0D2B7C4	DNA repair protein.	Uncharacterized protein.	0.918
PV09_00140	PV09_02483	A0A0D2AR76	A0A0D2AIS3	DNA repair protein.	Uncharacterized protein.	0.983
PV09_00140	PV09_02526	A0A0D2AR76	A0A0D1XVM6	DNA repair protein.	Uncharacterized protein.	0.949
PV09_00140	PV09_02755	A0A0D2AR76	A0A0D2AI71	DNA repair protein.	Replication factor C subunit 5.	0.677
PV09_00140	PV09_02973	A0A0D2AR76	A0A0D2AI68	DNA repair protein.	Uncharacterized protein.	0.949
PV09_00140	PV09_03093	A0A0D2AR76	A0A0D2B3S0	DNA repair protein.	Uncharacterized protein.	0.841
PV09_00140	PV09_03431	A0A0D2AR76	A0A0D2AF26	DNA repair protein.	Helicase ATP-binding domain-containing protein.	0.910
PV09_00140	PV09_03482	A0A0D2AR76	A0A0D1XS94	DNA repair protein.	DNA repair helicase rad15.	0.988
PV09_00140	PV09_04560	A0A0D2AR76	A0A0D2ACQ5	DNA repair protein.	CDK-activating kinase assembly factor MAT1.	0.772
PV09_00140	PV09_04691	A0A0D2AR76	A0A0D1YUS5	DNA repair protein.	Uncharacterized protein.	0.841
PV09_00140	PV09_05359	A0A0D2AR76	A0A0D1XMB4	DNA repair protein.	DNA polymerase.	0.698
PV09_00140	PV09_05438	A0A0D2AR76	A0A0D2A8X4	DNA repair protein.	WD_REPEATS_REGION domain-containing protein.	0.420
PV09_00140	PV09_05663	A0A0D2AR76	A0A0D2A8Z7	DNA repair protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.947

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