(18 nodes) Phosphopantetheine binding network (Streptomyces sp. C)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	EFL17214.1	Malonate decarboxylase, epsilon subunit. (321 aa)
	EFL18700.1	Predicted protein. (98 aa)
	EFL19185.1	Predicted protein; Belongs to the P-Pant transferase superfamily. (234 aa)
	EFL19350.1	Predicted protein. (650 aa)
	EFL19619.1	Predicted protein. (292 aa)
	EFL20101.1	Modular polyketide synthase. (290 aa)
	EFL20103.1	Modular polyketide synthase; Unextendable partial coding region. (372 aa)
	EFL20203.1	AMP-dependent synthetase and ligase. (576 aa)
	EFL20210.1	Polyketide synthase type I. (341 aa)
	EFL20216.1	Modular polyketide synthase; Truncated CDS. (611 aa)
	EFL20217.1	Lasalocid modular polyketide synthase. (1248 aa)
	EFL20218.1	Modular polyketide synthase. (3748 aa)
	EFL20219.1	Modular polyketide synthase. (2293 aa)
	EFL20232.1	Polyketide synthase type I. (1898 aa)
	EFL20234.1	Modular polyketide synthase. (4478 aa)
	EFL20241.1	Polyketide synthase type I. (1616 aa)
	EFL20242.1	Modular polyketide synthase. (353 aa)
	EFL20243.1	Malonate decarboxylase, epsilon subunit. (491 aa)

Your Current Organism:

Streptomyces sp. C

NCBI taxonomy Id: 253839
Other names: S. sp. C

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFL17214.1	EFL18700.1	SSNG_04466	SSNG_05952	Malonate decarboxylase, epsilon subunit.	Predicted protein.	0.995
EFL17214.1	EFL19185.1	SSNG_04466	SSNG_06437	Malonate decarboxylase, epsilon subunit.	Predicted protein; Belongs to the P-Pant transferase superfamily.	0.880
EFL17214.1	EFL19350.1	SSNG_04466	SSNG_06602	Malonate decarboxylase, epsilon subunit.	Predicted protein.	0.905
EFL17214.1	EFL19619.1	SSNG_04466	SSNG_06871	Malonate decarboxylase, epsilon subunit.	Predicted protein.	0.954
EFL17214.1	EFL20101.1	SSNG_04466	SSNG_07353	Malonate decarboxylase, epsilon subunit.	Modular polyketide synthase.	0.997
EFL17214.1	EFL20103.1	SSNG_04466	SSNG_07355	Malonate decarboxylase, epsilon subunit.	Modular polyketide synthase; Unextendable partial coding region.	0.999
EFL17214.1	EFL20203.1	SSNG_04466	SSNG_07455	Malonate decarboxylase, epsilon subunit.	AMP-dependent synthetase and ligase.	0.908
EFL17214.1	EFL20210.1	SSNG_04466	SSNG_07462	Malonate decarboxylase, epsilon subunit.	Polyketide synthase type I.	0.999
EFL17214.1	EFL20216.1	SSNG_04466	SSNG_07468	Malonate decarboxylase, epsilon subunit.	Modular polyketide synthase; Truncated CDS.	0.995
EFL17214.1	EFL20217.1	SSNG_04466	SSNG_07469	Malonate decarboxylase, epsilon subunit.	Lasalocid modular polyketide synthase.	0.998
EFL17214.1	EFL20218.1	SSNG_04466	SSNG_07470	Malonate decarboxylase, epsilon subunit.	Modular polyketide synthase.	0.995
EFL17214.1	EFL20219.1	SSNG_04466	SSNG_07471	Malonate decarboxylase, epsilon subunit.	Modular polyketide synthase.	0.995
EFL17214.1	EFL20232.1	SSNG_04466	SSNG_07484	Malonate decarboxylase, epsilon subunit.	Polyketide synthase type I.	0.999
EFL17214.1	EFL20234.1	SSNG_04466	SSNG_07486	Malonate decarboxylase, epsilon subunit.	Modular polyketide synthase.	0.995
EFL17214.1	EFL20241.1	SSNG_04466	SSNG_07493	Malonate decarboxylase, epsilon subunit.	Polyketide synthase type I.	0.995
EFL17214.1	EFL20242.1	SSNG_04466	SSNG_07494	Malonate decarboxylase, epsilon subunit.	Modular polyketide synthase.	0.999
EFL17214.1	EFL20243.1	SSNG_04466	SSNG_07495	Malonate decarboxylase, epsilon subunit.	Malonate decarboxylase, epsilon subunit.	0.999
EFL18700.1	EFL17214.1	SSNG_05952	SSNG_04466	Predicted protein.	Malonate decarboxylase, epsilon subunit.	0.995
EFL18700.1	EFL19185.1	SSNG_05952	SSNG_06437	Predicted protein.	Predicted protein; Belongs to the P-Pant transferase superfamily.	0.999
EFL18700.1	EFL19350.1	SSNG_05952	SSNG_06602	Predicted protein.	Predicted protein.	0.999