(7 nodes) Phosphopantetheine binding network (Streptomyces sp. C)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	EFL19350.1	Predicted protein. (650 aa)
	EFL19619.1	Predicted protein. (292 aa)
	EFL20103.1	Modular polyketide synthase; Unextendable partial coding region. (372 aa)
	EFL20216.1	Modular polyketide synthase; Truncated CDS. (611 aa)
	EFL20241.1	Polyketide synthase type I. (1616 aa)
	EFL20242.1	Modular polyketide synthase. (353 aa)
	EFL20243.1	Malonate decarboxylase, epsilon subunit. (491 aa)

Your Current Organism:

Streptomyces sp. C

NCBI taxonomy Id: 253839
Other names: S. sp. C

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFL19350.1	EFL19619.1	SSNG_06602	SSNG_06871	Predicted protein.	Predicted protein.	0.999
EFL19350.1	EFL20103.1	SSNG_06602	SSNG_07355	Predicted protein.	Modular polyketide synthase; Unextendable partial coding region.	0.999
EFL19350.1	EFL20216.1	SSNG_06602	SSNG_07468	Predicted protein.	Modular polyketide synthase; Truncated CDS.	0.999
EFL19350.1	EFL20241.1	SSNG_06602	SSNG_07493	Predicted protein.	Polyketide synthase type I.	0.999
EFL19350.1	EFL20242.1	SSNG_06602	SSNG_07494	Predicted protein.	Modular polyketide synthase.	0.999
EFL19350.1	EFL20243.1	SSNG_06602	SSNG_07495	Predicted protein.	Malonate decarboxylase, epsilon subunit.	0.999
EFL19619.1	EFL19350.1	SSNG_06871	SSNG_06602	Predicted protein.	Predicted protein.	0.999
EFL19619.1	EFL20103.1	SSNG_06871	SSNG_07355	Predicted protein.	Modular polyketide synthase; Unextendable partial coding region.	0.999
EFL19619.1	EFL20216.1	SSNG_06871	SSNG_07468	Predicted protein.	Modular polyketide synthase; Truncated CDS.	0.998
EFL19619.1	EFL20241.1	SSNG_06871	SSNG_07493	Predicted protein.	Polyketide synthase type I.	0.999
EFL19619.1	EFL20242.1	SSNG_06871	SSNG_07494	Predicted protein.	Modular polyketide synthase.	0.999
EFL19619.1	EFL20243.1	SSNG_06871	SSNG_07495	Predicted protein.	Malonate decarboxylase, epsilon subunit.	0.999
EFL20103.1	EFL19350.1	SSNG_07355	SSNG_06602	Modular polyketide synthase; Unextendable partial coding region.	Predicted protein.	0.999
EFL20103.1	EFL19619.1	SSNG_07355	SSNG_06871	Modular polyketide synthase; Unextendable partial coding region.	Predicted protein.	0.999
EFL20103.1	EFL20216.1	SSNG_07355	SSNG_07468	Modular polyketide synthase; Unextendable partial coding region.	Modular polyketide synthase; Truncated CDS.	0.999
EFL20103.1	EFL20241.1	SSNG_07355	SSNG_07493	Modular polyketide synthase; Unextendable partial coding region.	Polyketide synthase type I.	0.997
EFL20103.1	EFL20242.1	SSNG_07355	SSNG_07494	Modular polyketide synthase; Unextendable partial coding region.	Modular polyketide synthase.	0.985
EFL20103.1	EFL20243.1	SSNG_07355	SSNG_07495	Modular polyketide synthase; Unextendable partial coding region.	Malonate decarboxylase, epsilon subunit.	0.999
EFL20216.1	EFL19350.1	SSNG_07468	SSNG_06602	Modular polyketide synthase; Truncated CDS.	Predicted protein.	0.999
EFL20216.1	EFL19619.1	SSNG_07468	SSNG_06871	Modular polyketide synthase; Truncated CDS.	Predicted protein.	0.998