STRINGSTRING
BP0020 BP0020 BP0035 BP0035 BP0077 BP0077 BP0078 BP0078 rfaC rfaC kdtA kdtA BP0099 BP0099 BP0100 BP0100 dsbA dsbA BP0116 BP0116 BP0117 BP0117 BP0118 BP0118 BP0162 BP0162 pcnB pcnB BP0240 BP0240 BP0241 BP0241 amiC amiC sspB sspB sspA sspA BP0325 BP0325 gmhA gmhA BP0459 BP0459 BP0530 BP0530 rpoN-2 rpoN-2 lptA lptA BP0699 BP0699 BP0700 BP0700 BP0701 BP0701 BP0793 BP0793 BP0836 BP0836 BP0837 BP0837 BP0840 BP0840 BP0870 BP0870 BP0872 BP0872 tpm tpm vir-18 vir-18 BP0878 BP0878 BP0908 BP0908 rfaE rfaE rfaD rfaD BP1061 BP1061 BP1066 BP1066 BP1083 BP1083 comL comL norM norM BP1231 BP1231 dsbB dsbB bamA bamA lpxD lpxD fabZ fabZ lpxA lpxA lpxB lpxB BP1463 BP1463 BP1547 BP1547 BP1548 BP1548 BP1569 BP1569 rlmJ rlmJ ppiD ppiD BP1829 BP1829 BP1830 BP1830 BP1831 BP1831 lpxH lpxH BP1907 BP1907 lptE lptE BP2058 BP2058 BP2060 BP2060 bamB bamB BP2204 BP2204 waaF waaF BP2325 BP2325 BP2336 BP2336 BP2342 BP2342 kdsA kdsA BP2420 BP2420 BP2486 BP2486 omlA omlA BP2525 BP2525 BP2526 BP2526 BP2527 BP2527 BP2528 BP2528 BP2529 BP2529 BP2530 BP2530 BP2560 BP2560 BP2764 BP2764 BP2765 BP2765 lpxK lpxK kdsB kdsB BP2792 BP2792 priB priB BP2804 BP2804 BP2851 BP2851 bpH1 bpH1 dltB dltB dltD dltD pcp pcp BP2994 BP2994 BP3003 BP3003 BP3012 BP3012 BP3013 BP3013 lpxC lpxC BP3038 BP3038 BP3072 BP3072 BP3073 BP3073 BP3075 BP3075 xerC xerC lolB lolB BP3128 BP3128 BP3207 BP3207 dsbC dsbC BP3290 BP3290 BP3295 BP3295 BP3296 BP3296 lptD lptD cpoB cpoB pal pal tolB tolB BP3344 BP3344 BP3345 BP3345 tolQ tolQ BP3347 BP3347 BP3393 BP3393 BP3394 BP3394 BP3396 BP3396 BP3397 BP3397 BP3399 BP3399 BP3400 BP3400 BP3401 BP3401 BP3402 BP3402 BP3441 BP3441 BP3467 BP3467 BP3468 BP3468 BP3557 BP3557 BP3559 BP3559 ligA ligA BP3595 BP3595 BP3602 BP3602 cutA cutA dsbD dsbD BP3731 BP3731 BP3741 BP3741 BP3742 BP3742 BP3749 BP3749 BP3752 BP3752 BP3757 BP3757 BP3758 BP3758 BP3759 BP3759 BP3760 BP3760 BP3761 BP3761 BP3864 BP3864
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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BP0020Probable two-component sensor protein (Pseudogene); HMMPfam hit to PF00512, His Kinase A (phosphoacceptor) domain. (368 aa)
BP0035Putative haloacid dehalogenase-like hydrolase; Similar to Pseudomonas fluorescens hisb-like protein TR:Q9F729 (EMBL:AF286536) (213 aa) fasta scores: E(): 3.1e-37, 57.062% id in 177 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0006 pa0006 TR:Q9I7C0 (EMBL:AE004440) (178 aa) fasta scores: E(): 8.4e-38, 58.286% id in 175 aa. (179 aa)
BP0077Putative exported protein; Similar to Pseudomonas stutzeri hypothetical 9.0 kDa protein TR:Q9RLD2 (EMBL:AJ249642) (77 aa) fasta scores: E(): 0.021, 33.333% id in 81 aa. (83 aa)
BP0078Putative membrane protein; Similar to Neisseria meningitidis hypothetical inner membrane protein nma2189 TR:Q9JSQ1 (EMBL:AL162758) (268 aa) fasta scores: E(): 2.2e-25, 37.184% id in 277 aa, and to Azospirillum brasilense hypothetical 28.8 kDa protein in nifR3-like 5'region SW:YNR3_AZOBR (P45674) (271 aa) fasta scores: E(): 1.6e-13, 31.707% id in 287 aa. (280 aa)
rfaCProbable heptosyltransferase; Identical to the previously sequenced Bordetella pertussis DNA for lipopolysaccharide biosynthesis locus RfaC TR:Q45375 (EMBL:X90711) (335 aa) fasta scores: E(): 6.2e-133, 100.000% id in 335 aa, and to Bordetella bronchiseptica putative heptosyltransferase WaaC TR:O88002 (EMBL:AJ007747) (335 aa) fasta scores: E(): 1.3e-132, 99.701% id in 335 aa, and Similar to Escherichia coli lipopolysaccharide heptosyltransferase-1 RfaC or WaaC or Rfa-2 or B3621 SW:RFAC_ECOLI (P24173) (319 aa) fasta scores: E(): 7.6e-31, 48.485% id in 297 aa. (335 aa)
kdtA3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. (428 aa)
BP0099Putative integral membrane protein; Similar to Caulobacter crescentus putative ABC transporter, permease protein, Cc2318 TR:Q9A5X9 (EMBL:AE005902) (371 aa) fasta scores: E(): 2.2e-35, 35.925% id in 373 aa, and to Campylobacter jejuni putative ABC transport system permease protein iamb or cj1646 TR:Q9PM30 (EMBL:AL139079) (369 aa) fasta scores: E(): 3.2e-31, 34.451% id in 328 aa. (376 aa)
BP0100Similar to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter Pa3212 TR:Q9HZ28 (EMBL:AE004744) (264 aa) fasta scores: E(): 1.3e-42, 54.251% id in 247 aa, and to Caulobacter crescentus ABC transporter, ATP-binding protein cc2319 TR:Q9A5X8 (EMBL:AE005902) (278 aa) fasta scores: E(): 2e-42, 54.032% id in 248 aa. (279 aa)
dsbAThiol:disulfide interchange protein DsbA precursor; Involved in disulfide-bond formation. Acts by transferring its disulfide bond to other proteins (By similarity). Required for periplasmic assembly of the pertussis toxin (PTX); Belongs to the thioredoxin family. DsbA subfamily. (209 aa)
BP0116Similar to Ralstonia solanacearum hypothetical protein Rsc0288 or Rs03255 SWALL:Q8Y2P7 (EMBL:AL646058) (105 aa) fasta scores: E(): 0.0019, 32.74% id in 113 aa. (126 aa)
BP0117Hypothetical protein; No significant database matches. (119 aa)
BP0118Transposase for IS1663; Similar to Neisseria meningitidis putative invertase/transposase nma1800 TR:Q9JTF3 (EMBL:AL162757) (318 aa) fasta scores: E(): 2e-17, 28.48% id in 316 aa and Acinetobacter spSE19. pilin inverting protein chnY TR:Q9F7E1 (EMBL:AF282240) (324 aa) fasta scores: E(): 8.2e-50, 47.516% id in 322 aa. (338 aa)
BP0162Putative membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa5528 TR:Q9HT45 (EMBL:AE004965) (284 aa) fasta scores: E(): 1.7e-05, 35.294% id in 323 aa, and to Agrobacterium tumefaciens Agr_l_2266p agr_l_2266 TR:AAK89700 (EMBL:AE008313) (378 aa) fasta scores: E(): 2.7e-05, 28.075% id in 374 aa. (340 aa)
pcnBpoly(A) polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (451 aa)
BP0240Similar to Pseudomonas aeruginosa hypothetical protein Pa0335 TR:Q9I6F6 (EMBL:AE004471) (217 aa) fasta scores: E(): 1e-33, 46.575% id in 219 aa, and to Neisseria meningitidis hypothetical protein Nma1278 TR:Q9JUK0 (EMBL:AL162755) (222 aa) fasta scores: E(): 2e-31, 41.629% id in 221 aa. (232 aa)
BP0241Similar to Neisseria meningitidis hypothetical protein Nma1279 TR:Q9JUJ9 (EMBL:AL162755) (243 aa) fasta scores: E(): 1e-19, 35.470% id in 234 aa, and to Escherichia coli hypothetical protein yfge YfgE or B2496 or Z3759 or Ecs3358 SW:YFGE_ECOLI (P76570) (248 aa) fasta scores: E(): 6.5e-15, 33.906% id in 233 aa; Belongs to the DnaA family. (233 aa)
amiCSimilar to Escherichia coli N-acetylmuramoyl-L-alanine amidase AmiC precursor or B2817 SW:AMIC_ECOLI (Q46929) (417 aa) fasta scores: E(): 8.8e-41, 50.608% id in 411 aa, and to Pseudomonas aeruginosa N-acetylmuramoyl-L-alanine amidase AmiA or Pa5538 TR:Q9HT36 (EMBL:AE004966) (397 aa) fasta scores: E(): 1e-33, 41.667% id in 408 aa. (414 aa)
sspBSimilar to Escherichia coli stringent starvation protein B SspB or B3228 or Z4586 or Ecs4101 SW:SSPB_ECOLI (P25663) (165 aa) fasta scores: E(): 9.6e-13, 40.845% id in 142 aa, and to Neisseria meningitidis stringent starvation protein B Nmb1952 TR:Q9JXN9 (EMBL:AE002543) (130 aa) fasta scores: E(): 9.6e-19, 50.407% id in 123 aa. (149 aa)
sspASimilar to Escherichia coli stringent starvation protein A SspA or Ssp or Pog or B3229 SW:SSPA_ECOLI (P05838) (211 aa) fasta scores: E(): 5.4e-29, 42.857% id in 203 aa, and to Neisseria meningitidis stringent starvation protein A Nmb1953 TR:Q9JXN8 (EMBL:AE002543) (201 aa) fasta scores: E(): 1.4e-56, 70.443% id in 203 aa. (203 aa)
BP0325Putative membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein Pa3827 TR:Q9HXH5 (EMBL:AE004800) (355 aa) fasta scores: E(): 3e-11, 28.212% id in 358 aa, and to Vibrio cholerae hypothetical protein Vc2499 TR:Q9KP76 (EMBL:AE004319) (356 aa) fasta scores: E(): 9.1e-10, 25.956% id in 366 aa. (392 aa)
gmhAProbable phosphosugar isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate. (200 aa)
BP0459Probable aminoacyl-tRNA synthetase (Pseudogene); HMMPfam hit to PF00749, tRNA synthetases class I (E and Q). (873 aa)
BP0530Conserved hypothetical protein; Similar to Burkholderia cepacia ureidoglycolate hydrolase AllA TR:Q9AP01 (EMBL:AF317836) (177 aa) fasta scores: E(): 0.0025, 28.289% id in 152 aa, and to Rhodobacter capsulatus probable ureidoglycolate hydrolase SW:ALLA_RHOCA (O68109) (161 aa) fasta scores: E(): 0.0036, 32.558% id in 129 aa. (199 aa)
rpoN-2Probable sigma(54) modulation protein (Pseudogene); (CA)2 in pertussis; (CA)1 deleted in parapertussis and bronchiseptica. (263 aa)
lptAPutative exported protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. (206 aa)
BP0699Putative exported protein; Similar to Neisseria meningitidis putative periplasmic hypothetical protein Nma2133 TR:Q9JSU4 (EMBL:AL162758) (193 aa) fasta scores: E(): 0.00062, 23.711% id in 194 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4459 TR:Q9HVV8 (EMBL:AE004860) (190 aa) fasta scores: E(): 0.04, 22.989% id in 174 aa. (209 aa)
BP0700Probable hydrolase; Similar to Neisseria meningitidis hypothetical protein Nma2134 TR:Q9JSU3 (EMBL:AL162758) (178 aa) fasta scores: E(): 3.7e-25, 44.706% id in 170 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4458 TR:Q9HVV9 (EMBL:AE004860) (179 aa) fasta scores: E(): 4.9e-25, 48.428% id in 159 aa. (202 aa)
BP0701Conserved hypothetical protein; Similar to Escherichia coli GutQ protein GutQ or SrlQ or B2708 SW:GUTQ_ECOLI (P17115) (321 aa) fasta scores: E(): 2e-49, 48.438% id in 320 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4457 TR:Q9HVW0 (EMBL:AE004860) (326 aa) fasta scores: E(): 6.5e-60, 56.190% id in 315 aa; Belongs to the SIS family. GutQ/KpsF subfamily. (329 aa)
BP0793Putative lipoprotein; No significant database matches. (175 aa)
BP0836Putative exported protein; Similar to Rhizobium meliloti putative oxidoreductase protein Smc01572 TR:CAC46902 (EMBL:AL591790) (155 aa) fasta scores: E(): 0.00047, 32.593% id in 135 aa, and to Rhizobium loti probable oxidoreductase Mlr0254 TR:Q98N82 (EMBL:AP002994) (305 aa) fasta scores: E(): 0.016, 30.075% id in 133 aa. (144 aa)
BP0837Similar to Pseudomonas aeruginosa hypothetical protein Pa4093 TR:Q9HWT5 (EMBL:AE004825) (138 aa) fasta scores: E(): 1.2e-09, 40.164% id in 122 aa, and to Rhizobium meliloti hypothetical transmembrane protein Smc01805 TR:CAC45823 (EMBL:AL591786) (143 aa) fasta scores: E(): 3e-08, 34.815% id in 135 aa. (144 aa)
BP0840Outer membrane porin protein precursor; Forms anion selective channels. (385 aa)
BP0870Putative exported protein; Similar to Zymomonas mobilis hypothetical 23.9 kDa protein TR:Q9EZA0 (EMBL:AF300471) (220 aa) fasta scores: E(): 0.00027, 33.333% id in 207 aa. (218 aa)
BP0872Similar to Rhizobium loti ATP-binding protein of ABC transporter Mll0815 TR:Q98LY9 (EMBL:AP002995) (601 aa) fasta scores: E(): 3.1e-156, 74.624% id in 599 aa, and to Agrobacterium tumefaciens Agr_l_309p TR:AAK88722 (EMBL:AE008213) (600 aa) fasta scores: E(): 4.1e-147, 68.781% id in 599 aa. (610 aa)
tpmSimilar to Pseudomonas syringae thiopurine S-methyltransferase Tpm SW:TPMT_PSESJ (O86262) (218 aa) fasta scores: E(): 1.1e-35, 44.495% id in 218 aa, and to Pseudomonas aeruginosa thiopurine methyltransferase Tpm or Pa2832 TR:Q9I011 (EMBL:AE004710) (218 aa) fasta scores: E(): 1.5e-37, 49.309% id in 217 aa; Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family. (219 aa)
vir-18Vir-repressed protein; Identical to the previously sequenced Bordetella pertussis vir-repressed protein Vir-18 TR:Q04274 (EMBL:M37228) (23 aa) fasta scores: E(): 0.0007, 100.000% id in 23 aa. (50 aa)
BP0878Putative phospholipase; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family. (433 aa)
BP0908Putative lipoprotein (Pseudogene); (TC)2 in pertussis; (TC)1 in parapertussis and bronchiseptica. (136 aa)
rfaEADP-heptose synthase; Similar to Salmonella typhimurium ADP-heptose synthase RfaE TR:Q9AJ74 (EMBL:AF155126) (477 aa) fasta scores: E(): 7.1e-50, 52.508% id in 299 aa, and to Burkholderia pseudomallei putative ADP-heptose synthase WaaE TR:Q9WWX7 (EMBL:AF159428) (307 aa) fasta scores: E(): 6.6e-59, 59.603% id in 302 aa. (313 aa)
rfaDADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose. (329 aa)
BP1061Similar to Neisseria meningitidis putative transglycosylase Nma1674 TR:Q9JTQ7 (EMBL:AL162756) (207 aa) fasta scores: E(): 0.017, 30.05% id in 193 aa, and to Caulobacter crescentus transglycosylase, putative Cc2416 TR:Q9A5N1 (EMBL:AE005911) (218 aa) fasta scores: E(): 0.034, 31.32% id in 166 aa. (276 aa)
BP1066Conserved hypothetical protein (Pseudogene); (G)4 in pertussis; GG(A)GG in parapertussis and bronchiseptica. (154 aa)
BP1083C-terminal region of a putative membrane protein (pseudogene); 2 probable transmembrane helices predicted for BP1081 by TMHMM2.0 at aa 10-32 and 160-182. (266 aa)
comLCompetence lipoprotein precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (266 aa)
norMSimilar to Escherichia coli multidrug resistance protein NorM or B1663 SW:NORM_ECOLI (P37340) (457 aa) fasta scores: E(): 1.2e-33, 32% id in 450 aa, and to Neisseria meningitidis probable multidrug resistance protein NorM or Nmb0812 SW:NORM_NEIMB (Q9K015) (459 aa) fasta scores: E(): 3e-46, 35.21% id in 443 aa. (468 aa)
BP1231Putative membrane protein; Similar to Neisseria meningitidis putative inner membrane protein Nma0497 TR:Q9JW86 (EMBL:AL162753) (558 aa) fasta scores: E(): 2.5e-18, 26.04% id in 599 aa, and to Xylella fastidiosa hypothetical protein Xf0929 TR:Q9PEU9 (EMBL:AE003932) (583 aa) fasta scores: E(): 2.8e-06, 27.3% id in 498 aa. (578 aa)
dsbBSimilar to Escherichia coli disulfide bond formation protein B DsbB or RoxB or B1185 or Z1948 or Ecs1680 SW:DSBB_ECOLI (P30018) (176 aa) fasta scores: E(): 3.1e-05, 28.47% id in 144 aa, and to Pseudomonas aeruginosa disulfide bond formation protein B 1 DsbB1 or Pa5256 SW:DSB1_PSEAE (P21482) (163 aa) fasta scores: E(): 8.3e-08, 30.57% id in 157 aa. (158 aa)
bamAProbable surface antigen; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (778 aa)
lpxDUDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. (363 aa)
fabZ(3R)-hydroxymyristol-[acyl carrier protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. (151 aa)
lpxAacyl-[acyl-carrier-protein]--UDP-N-acetylglucos amine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (264 aa)
lpxBlipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (393 aa)
BP1463Putative lipoprotein; Similar to Pseudomonas aeruginosa hypothetical protein Pa4632 TR:Q9HVF9 (EMBL:AE004877) (273 aa) fasta scores: E(): 6.6e-50, 53% id in 266 aa, and to Vibrio cholerae hypothetical protein Vca0581 TR:Q9KM08 (EMBL:AE004389) (263 aa) fasta scores: E(): 5.6e-24, 36.53% id in 271 aa. (278 aa)
BP1547Conserved hypothetical protein; Weakly similar to Caulobacter crescentus hypothetical protein Cc3537 TR:Q9A2M0 (EMBL:AE006012) (996 aa) fasta scores: E(): 1.6e-09, 26.54% id in 859 aa. (886 aa)
BP1548Putative nuclease/helicase; Similar to Escherichia coli exodeoxyribonuclease V beta chain RecB or RorA or B2820 SW:EX5B_ECOLI (P08394) (1180 aa) fasta scores: E(): 0.0011, 23.34% id in 1118 aa, and to Rhizobium meliloti putative ATP-dependent nuclease/helicase protein Smc02760 TR:CAC41421 (EMBL:AL591782) (1189 aa) fasta scores: E(): 6.7e-17, 27.9% id in 1229 aa; Belongs to the helicase family. UvrD subfamily. (1134 aa)
BP1569Putative lipoprotein; Similar to Burkholderia solanacearum probable transmembrane protein Rsc1146 TR:CAD14848 (EMBL:AL646062) (398 aa) fasta scores: E(): 8.6e-37, 41.99% id in 381 aa, and to Neisseria meningitidis hypothetical protein Nmb0928 TR:Q9JZR5 (EMBL:AE002444) (398 aa) fasta scores: E(): 1.7e-32, 32.97% id in 376 aa. (375 aa)
rlmJConserved hypothetical protein; Specifically methylates the adenine in position 2030 of 23S rRNA. (287 aa)
ppiDSimilar to Escherichia coli peptidyl-prolyl cis-trans isomerase D PpiD or B0441 SW:PPID_ECOLI (P77241) (623 aa) fasta scores: E(): 2.9e-17, 26.07% id in 652 aa, and to Pseudomonas aeruginosa peptidyl-prolyl cis-trans isomerase D PpiD or Pa1805 TR:Q9I2T8 (EMBL:AE004606) (621 aa) fasta scores: E(): 6.5e-30, 31.49% id in 651 aa. (651 aa)
BP1829Putative lipoprotein (Pseudogene); 14 bp deletion in pertussis, relative to parapertussis and bronchiseptica, around this position. (525 aa)
BP1830Hypothetical protein; No significant database matches. (424 aa)
BP1831Hypothetical protein; The N-terminal region of this CDS is similar to Streptomyces coelicolor hypothetical 7.7 kDa protein Sc7h1.36C TR:O54195 (EMBL:AL021411) (81 aa) fasta scores: E(): 0.24, 45.45% id in 66 aa. (124 aa)
lpxHUDP-2,3-diacylglucosamine hydrolase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (249 aa)
BP1907Putative exported protein; Similar to Rhodobacter sphaeroides hypothetical 21.1 kDa protein putative Orf TR:Q53172 (EMBL:Z50182) (197 aa) fasta scores: E(): 0.41, 29.33% id in 150 aa, and to Desulfotomaculum thermocisternum hypothetical 25.2 kDa protein TR:Q9ZH15 (EMBL:AF074396) (224 aa) fasta scores: E(): 0.098, 25.98% id in 127 aa. (227 aa)
lptEPutative lipoprotein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane; Belongs to the LptE lipoprotein family. (219 aa)
BP2058Putative tautomerase; Shows weak similarity over the N-terminal 60 residues to tautomerases e.g. Pseudomonas putida 4-oxalocrotonate tautomerase xylH SW:XYLH_PSEPU (Q01468) (62 aa) fasta scores: E(): 0.017, 33.333% id in 60 aa. Shows full-length similarity to putative tautomerases e.g. Pseudomonas pavonaceae putative tautomerase TR:Q9EV83 (EMBL:AJ290446) (130 aa) fasta scores: E(): 0.0049, 35.484% id in 124 aa and to hypothetical proteins. (124 aa)
BP2060Similar to many hypothetical proteins e.g. Neisseria meningitidis putative transferase NMA1087 or NMB0869 TR:Q9JQL8 (EMBL:AL162755) (263 aa) fasta scores: E(): 1.5e-19, 32.432% id in 259 aa and Pseudomonas aeruginosa hypothetical protein PA2842 TR:Q9I001 (EMBL:AE004711) (249 aa) fasta scores: E(): 1.3e-06, 25.909% id in 220 aa. (256 aa)
bamBPutative quinoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (386 aa)
BP2204Similar to Caulobacter crescentus putative outer membrane protein Cc0351 precursor SW:Y351_CAUCR (Q9AB80) (254 aa) fasta scores: E(): 5.8e-12, 29.38% id in 245 aa, and to Escherichia coli mlta-interacting protein precursor MipA or b1782 SW:MIPA_ECOLI (P77486) (248 aa) fasta scores: E(): 3e-07, 27.64% id in 246 aa. (253 aa)
waaFHeptosyltransferase II; Previously sequenced as Bordetella pertussis heptosyltransferase II WaaF TR:O07076 (EMBL:Y13475) (321 aa) fasta scores: E(): 2.3e-125, 100% id in 321 aa, and to Escherichia coli ADP-heptose--LPS heptosyltransferase II RfaF or WaaF or b3620 SW:RFAF_ECOLI (P37692) (348 aa) fasta scores: E(): 3.2e-08, 29.58% id in 311 aa. (321 aa)
BP2325Putative transferase; May be involved in LPS biosynthesis. Similar to many eg. Pseudomonas aeruginosa glucosyltransferase I WaaG TR:Q9S648 (EMBL:AF090724) (373 aa) fasta scores: E(): 3e-13, 29.21% id in 356 aa, and to Serratia marcescens putative glycosyltransferase TR:Q9X977 (EMBL:U52844) (375 aa) fasta scores: E(): 3.6e-10, 28.98% id in 376 aa. (373 aa)
BP2336Conserved hypothetical protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. (90 aa)
BP2342Hypothetical protein; Weakly similar to Escherichia coli O157:H7 EDL933 hypothetical protein YrbL TR:AAG58341 (EMBL:AE005548) (210 aa) fasta scores: E(): 0.023, 26.57% id in 207 aa. Also similar to BP3672, 45.673% identity (47.500% ungapped) in 208 aa overlap. (219 aa)
kdsASimilar to many eg. Escherichia coli 2-dehydro-3-deoxyphosphooctonate aldolase KdsA or b1215 SW:KDSA_ECOLI (P17579) (284 aa) fasta scores: E(): 1.6e-45, 44.87% id in 283 aa, and to Xylella fastidiosa 2-dehydro-3-deoxyphosphooctonate aldolase xf1289 TR:Q9PDU0 (EMBL:AE003962) (295 aa) fasta scores: E(): 3.1e-76, 71.27% id in 282 aa, and to Pisum sativum 2-dehydro-3-deoxyphosphooctonate aldolase KdsA SW:KDSA_PEA (O50044) (290 aa) fasta scores: E(): 2e-53, 54.85% id in 268 aa; Belongs to the KdsA family. (285 aa)
BP2420Putative integral membrane protein; Similar to Neisseria meningitidis hypothetical protein Nmb1570 TR:Q9JYI6 (EMBL:AE002507) (371 aa) fasta scores: E(): 1.6e-33, 32.86% id in 359 aa and to Neisseria meningitidis conserved integral membrane hypothetical protein Nma1759 TR:Q9JTI7 (EMBL:AL162757) (371 aa) fasta scores: E(): 2.1e-33, 32.78% id in 363 aa. (370 aa)
BP2486Putative exported protein; Weakly similar to Haemophilus influenzae hypothetical protein Hi0874 SW:Y874_HAEIN (P44067) (399 aa) fasta scores: E(): 1.4e-09, 22.42% id in 223 aa. (413 aa)
omlAOuter membrane lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (182 aa)
BP2525N-terminal region of a putative membrane protein (pseudogene); This CDS is disrupted by the insertion of IS481. The C-terminal region of this CDS is BP1081. (281 aa)
BP2526Probable secretory protein (pseudogene); HMMPfam hit to PF00498, FHA domain; Belongs to the bacterial secretin family. (470 aa)
BP2527Putative secretory protein; Weakly similar to several e.g. Rhizobium meliloti putative pilus assembly signal peptide protein TR:CAC41527 (EMBL:AL591782) (269 aa) fasta scores: E(): 0.014, 24.545% id in 220 aa. (281 aa)
BP2528Putative exported protein; No significant database hits. (218 aa)
BP2529Putative exported protein (pseudogene); Signal peptide predicted for BP2528 by SignalP 2.0 HMM (Signal peptide probabilty 0.972) with cleavage site probability 0.678 between residues 30 and 31. (438 aa)
BP2530Integral membrane protein; Similar to the N-terminus of Xylella fastidiosa fimbrial protein xf2542 TR:Q9PAH6 (EMBL:AE004061) (148 aa) fasta scores: E(): 0.68, 36.364% id in 77 aa. (87 aa)
BP2560Putative exported protein; No significant database hits. (138 aa)
BP2764Similar to several e.g. Synechocystis sp putative biopolymer transport ExbB-like protein 3 sll1404 SW:EXB3_SYNY3 (P72604) (210 aa) fasta scores: E(): 2.4e-09, 29.89% id in 184 aa. (206 aa)
BP2765Similar to many including Vibrio cholerae biopolymer transport protein Exbd2 or Vc1545 SW:EXD2_VIBCH (Q9ZHV9) (134 aa) fasta scores: E(): 5.3e-06, 30.3% id in 132 aa and to Bordetella pertussis ExbD protein TR:Q9S3M4 (EMBL:AJ132741) (155 aa) fasta scores: E(): 9.4e-06, 31.61% id in 136 aa. (137 aa)
lpxKPutative tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). (347 aa)
kdsB3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. (254 aa)
BP2792Hypothetical protein; No significant database hits. (278 aa)
priBPrimosomal replication protein n; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family. (107 aa)
BP2804Putative iron-sulfur protein; Similar to Bordetella bronchiseptica AlcE, involved in the iron siderophore alcaligin biosynthesis, SWALL:O52833 (EMBL:AJ000061) (397 aa) fasta scores: E(): 3.3e-120, 71.57% id in 380 aa. Also similar to BP2460, 71.842% identity in 380 aa overlap. (383 aa)
BP2851Highly similar to the Bordetella pertussis outer membrane porin protein precursor (BP0840) SW:OMP_BORPE (Q04064) (385 aa) fasta scores: E(): 6.4e-58, 53.72% id in 389 aa. Also similar to BP0267 (63.345% identity in 281 aa overlap), and BP0840 (53.728% identity in 389 aa overlap). (369 aa)
bpH1Histone protein; Previously sequenced in Bordetella pertussis as histone H1 TR:Q45370 (EMBL:L37438) (182 aa) fasta scores: E(): 1.1e-39, 97.14% id in 175 aa. (175 aa)
dltBPutative protein involved in the transfer of D-alanine into teichoic acids; Similar to Bacillus subtilis protein DltB thought to be involved in D-alanine transport SW:DLTB_BACSU (P39580) (395 aa) fasta scores: E(): 5.5e-25, 33.68% id in 282 aa, and to Lactococcus lactis peptidoglycan biosynthesis protein DltB TR:Q9CG50 (EMBL:AE006358) (407 aa) fasta scores: E(): 1.8e-23, 34.69% id in 245 aa; Belongs to the membrane-bound acyltransferase family. (375 aa)
dltDPutative protein involved in the transfer of D-alanine into teichoic acids; Similar to Staphylococcus xylosus DltD dltD SWALL:Q9X2N7 (EMBL:AF032440) (382 aa) fasta scores: E(): 3.8e-07, 21.71% id in 327 aa, and to Streptococcus agalactiae secreted protein, DltD dltD SWALL:Q8VM64 (EMBL:AJ291784) (420 aa) fasta scores: E(): 0.00019, 22.72% id in 330 aa. (375 aa)
pcpPutative lipoprotein; Similar to many Pectobacterium carotovorum subspcarotovorum. outer membrane lipoprotein Pcp TR:Q9RB08 (EMBL:AF168687) (155 aa) fasta scores: E(): 3.6e-13, 40.64% id in 155 aa and to Salmonella typhimurium outer membrane lipoprotein SlyB SW:SLYB_SALTY (Q53549) (155 aa) fasta scores: E(): 8.1e-14, 40.64% id in 155 aa. Note the extended N-terminal region of the Bordetella orthologue. (167 aa)
BP2994Possible membrane protein; Weakly similar in parts to Pseudomonas aeruginosa hypothetical protein Pa4851 TR:Q9HUW2 (EMBL:AE004898) (421 aa) fasta scores: E(): 0.00026, 27.27% id in 418 aa. (365 aa)
BP3003Putative membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein PA0406 TR:Q9I698 (EMBL:AE004477) (319 aa) fasta scores: E(): 7.2e-18, 31.63% id in 294 aa. (299 aa)
BP3012Putative membrane protein; Similar to Rhizobium meliloti conserved hypothetical protein SMA1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.3e-40, 39.02% id in 328 aa. (349 aa)
BP3013Hypothetical protein; Poor database matches. Weakly similar to the N-terminal regions of Agrobacterium tumefaciens hypothetical protein AGR_C_2627p TR:AAK87216 (EMBL:AE008068) (292 aa) fasta scores: E(): 0.0046, 28.75% id in 240 aa, and Rhizobium loti hypothetical protein MLR0372 TR:Q98MZ7 (EMBL:AP002994) (296 aa) fasta scores: E(): 0.018, 25.45% id in 220 aa. (239 aa)
lpxCUDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family. (307 aa)
BP3038Putative membrane protein; Similar to Caulobacter crescentus hypothetical protein CC0411 TR:Q9AB23 (EMBL:AE005714) (132 aa) fasta scores: E(): 0.00047, 32.77% id in 119 aa, and to the C-terminal region of Neisseria meningitidis putative DnaJ-family protein NMA1461 TR:Q9JU75 (EMBL:AL162756) (240 aa) fasta scores: E(): 5e-07, 33.61% id in 119 aa. (123 aa)
BP3072Putative acyltransferase; Similar to Xylella fastidiosa lipid A biosynthesis lauroyl acyltransferase XF1348 TR:Q9PDN1 (EMBL:AE003967) (316 aa) fasta scores: E(): 7.9e-20, 31.08% id in 296 aa, and to Escherichia coli lipid A biosynthesis lauroyl acyltransferase HtrB SW:HTRB_ECOLI (EMBL:X61000) (306 aa) fasta scores: E(): 2.3e-12, 25.96% id in 285 aa. (284 aa)
BP3073Putative acyltransferase; Similar to Neisseria meningitidis HtrB/MsbB family protein NMB1418 TR:Q9JYV2 (EMBL:AE002491) (289 aa) fasta scores: E(): 1.2e-32, 35.14% id in 276 aa, and to Escherichia coli lipid A biosynthesis lauroyl acyltransferase HtrB SW:HTRB_ECOLI (EMBL:X61000) (306 aa) fasta scores: E(): 4.5e-28, 34.19% id in 272 aa. (296 aa)
BP3075Similar to Xylella fastidiosa hypothetical protein XF1482 TR:Q9PD97 (EMBL:AE003977) (226 aa) fasta scores: E(): 6.6e-13, 32.27% id in 220 aa. (230 aa)
xerCPutative integrase/recombinase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (326 aa)
lolBPutative outer membrane lipoprotein; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. (199 aa)
BP3128Similar to Pseudomonas aeruginosa hypothetical protein PA4667 SW:YAG7_PSEAE (P42810) (590 aa) fasta scores: E(): 9.6e-24, 28.9% id in 609 aa, and to Neisseria meningitidis putative periplasmic protein NMA1090 TR:Q9JUX9 (EMBL:AL162755) (612 aa) fasta scores: E(): 1.4e-18, 24.55% id in 619 aa. (628 aa)
BP3207Putative desaturase (pseudogene); In-frame TAG stop codon in pertussis; TGG in parapertussis and bronchiseptica. (292 aa)
dsbCPutative thiol:disulphide interchange protein (periplasmic); Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process (By similarity). Necessary for extracellular secretion of the pertussis toxin (PTX); Belongs to the thioredoxin family. DsbC subfamily. (279 aa)
BP3290Hypothetical protein; No significant database matches. (294 aa)
BP3295Putative peptidase; Similar to Bacillus halodurans carboxypeptidase G2 bh0352 TR:Q9KFW8 (EMBL:AP001508) (374 aa) fasta scores: E(): 1e-41, 37.46% id in 363 aa, and to Pseudomonas sp carboxypeptidase G2 precursor cpg2 SW:CBPG_PSES6 (P06621) (415 aa) fasta scores: E(): 2e-21, 26.41% id in 371 aa. (377 aa)
BP3296Hypothetical protein; No significant database matches. (301 aa)
lptDPutative outer membrane (permeability) protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. (790 aa)
cpoBPutative periplasmic protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. (229 aa)
palPutative peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (165 aa)
tolBPutative TolB-like translocation protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (438 aa)
BP3344Proline-rich inner membrane protein; No significant database matches. Contains possible coiled-coil region at residues 131-202. (324 aa)
BP3345Putative TolR-like translocation protein; Similar to Escherichia coli TolR protein or b0738 or z0906 or ecs0773 SW:TOLR_ECOLI (P05829) (142 aa) fasta scores: E(): 9.1e-09, 33.33% id in 138 aa. (152 aa)
tolQPutative TolQ-like translocation protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (226 aa)
BP3347Conserved hypothetical protein; Similar to many eg. Pasteurella multocida hypothetical protein Pm0971 TR:Q9CM67 (EMBL:AE006136) (136 aa) fasta scores: E(): 1.4e-19, 43.9% id in 123 aa. (142 aa)
BP3393Similar to Rhizobium meliloti putative transmembrane protein smc02882 TR:CAC41594 (EMBL:AL591782) (244 aa) fasta scores: E(): 0.09, 24.64% id in 211 aa. (266 aa)
BP3394Conserved hypothetical protein; Similar to Ralstonia solanacearum putative thioredoxin-like protein Rsc0067 or Rs02246 SWALL:Q8Y3B3 (EMBL:AL646057) (129 aa) fasta scores: E(): 7.1e-20, 51.12% id in 133 aa. (148 aa)
BP3396Putative conserved inner membrane protein; Similar to Streptomyces avermitilis hypothetical 10.3 kDa protein TR:BAB69324 (EMBL:AB070950) (97 aa) fasta scores: E(): 0.00047, 33.67% id in 98 aa, and to Staphylococcus aureus (strain N315) hypothetical protein Sas001 or Sav0011 TR:BAB56173 (EMBL:AP003129) (109 aa) fasta scores: E(): 0.19, 26.47% id in 102 aa. (109 aa)
BP3397Similar to Rhodobacter sphaeroides putative membrane protein TR:Q9KX17 (EMBL:Y09560) (235 aa) fasta scores: E(): 1.5e-15, 28.94% id in 228 aa. (249 aa)
BP3399Similar to Neisseria meningitidis hypothetical protein NMA0721 TR:Q9JVS1 (EMBL:AL162754) (67 aa) fasta scores: E(): 6.4e-07, 48.27% id in 58 aa. (70 aa)
BP3400Hypothetical protein; No significant database matches. (140 aa)
BP3401Similar to Escherichia coli hypothetical protein YheT or b3353 SW:YHET_ECOLI (P45524) (340 aa) fasta scores: E(): 1.1e-31, 36.8% id in 269 aa. (366 aa)
BP3402Putative exported protein; Similar to Vibrio cholerae hypothetical protein Vc2164 TR:Q9KQ40 (EMBL:AE004288) (484 aa) fasta scores: E(): 8.4e-33, 31.91% id in 495 aa. (505 aa)
BP3441Conserved hypothetical protein; Similar to Alcaligenes eutrophus granule-associated protein PhaP TR:Q44013 (EMBL:X85729) (192 aa) fasta scores: E(): 5.6e-23, 44.79% id in 192 aa. Weakly similar to an internal region of Escherichia coli membrane protein involved in colicin uptake TolA SW:TOLA_ECOLI (P19934) (421 aa) fasta scores: E(): 1.4, 27.02% id in 185 aa. (192 aa)
BP3467Putative exported protein; Similar to Escherichia coli suppressor of OmpF assembly mutants, outer membrane protein AsmA SW:ASMA_ECOLI (P28249) (617 aa) fasta scores: E(): 0.0063, 23.79% id in 395 aa, and to Vibrio cholerae AsmA protein VC1039 TR:Q9KT66 (EMBL:AE004185) (703 aa) fasta scores: E(): 5.5e-20, 25.44% id in 837 aa. (839 aa)
BP3468Hypothetical protein; Poor database matches. Similar to the N-terminal regions of Streptomyces coelicolor hypothetical protein SCG20A.02 TR:Q9K3N8 (EMBL:AL360055) (275 aa) fasta scores: E(): 0.025, 29.6% id in 125 aa, and Pseudomonas aeruginosa hypothetical protein PA3022 TR:Q9HZI4 (EMBL:AE004727) (268 aa) fasta scores: E(): 0.015, 31.06% id in 103 aa. (128 aa)
BP3557Putative membrane protein; Similar to Escherichia coli hypothetical protein YgeD SW:YGED_ECOLI (P39196) (397 aa) fasta scores: E(): 4.7e-21, 37.19% id in 414 aa, and to Neisseria meningitidis putative integral membrane protein NMA1715 TR:Q9JTM1 (EMBL:AL162756) (436 aa) fasta scores: E(): 2.2e-05, 23.38% id in 449 aa. (436 aa)
BP3559Putative membrane protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family. (352 aa)
ligADNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. (696 aa)
BP3595Putative outer membrane protein; Similar to Salmonella typhimurium vitamin B12 receptor precursor BtuB SW:BTUB_SALTY (P37409) (614 aa) fasta scores: E(): 5.4e-37, 28.33% id in 614 aa, and to Pseudomonas aeruginosa probable tonb-dependent receptor PA1271 TR:Q9I473 (EMBL:AE004557) (616 aa) fasta scores: E(): 3.2e-39, 35.2% id in 625 aa. (629 aa)
BP3602Putative outer membrane protein (pseudogene); Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. (162 aa)
cutAHistidine triad protein (pseudogene); HMMPfam hit to PF01230, HIT family. (113 aa)
dsbDThiol:disulfide interchange protein; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. (645 aa)
BP3731Similar to Ralstonia solanacearum hypothetical protein rsc0305 rsc0305 or rs03272 SWALL:Q8Y2N0 (EMBL:AL646058) (294 aa) fasta scores: E(): 4e-07, 39.76% id in 259 aa. (237 aa)
BP3741Putative membrane protein; No significant database matches. (74 aa)
BP3742Putative membrane protein; Poor database matches. Similar to Rhizobium meliloti hypothetical transmembrane protein SMC00130 TR:CAC45479 (EMBL:AL591785) (46 aa) fasta scores: E(): 7.9, 44.82% id in 29 aa, and to Paracoccus denitrificans cox locus hypothetical protein 2 SW:YCO2_PARDE (P08302) (89 aa) fasta scores: E(): 8.7, 46.42% id in 28 aa. (40 aa)
BP3749Putative membrane protein; Poor database matches. Similar to Pseudomonas aeruginosa hypothetical protein PA1825 TR:Q9I2S0 (EMBL:AE004609) (214 aa) fasta scores: E(): 1.1e-07, 28.64% id in 199 aa. (212 aa)
BP3752Similar to Ralstonia solanacearum hypothetical protein Rsc2966 or Rs01331 SWALL:Q8XV65 (EMBL:AL646072) (241 aa) fasta scores: E(): 1.6e-25, 40.16% id in 249 aa, and to Rhizobium loti hypothetical protein MLL6832 TR:Q988A1 (EMBL:AP003010) (220 aa) fasta scores: E(): 7.7e-07, 30.3% id in 231 aa, and to Caulobacter crescentus hypothetical protein CC1445 TR:Q9A8A9 (EMBL:AE005819) (221 aa) fasta scores: E(): 0.00026, 25.53% id in 235 aa. (254 aa)
BP3757Similar to Vibrio cholerae ABC transporter, ATP-binding protein VC2520 TR:Q9KP56 (EMBL:AE004321) (267 aa) fasta scores: E(): 4.6e-41, 51.16% id in 258 aa, and to Neisseria meningitidis ABC transporter, ATP-binding protein NMB1966 TR:Q9JXN0 (EMBL:AE002544) (266 aa) fasta scores: E(): 2.4e-40, 51.4% id in 249 aa. (278 aa)
BP3758Putative membrane protein; Similar to Pseudomonas putida toluene tolerance protein Ttg2B TR:Q9Z401 (EMBL:AF106002) (265 aa) fasta scores: E(): 6.1e-45, 57.02% id in 242 aa, and to Pasteurella multocida hypothetical protein PM0175 TR:Q9CP79 (EMBL:AE006052) (261 aa) fasta scores: E(): 2.6e-48, 60.9% id in 243 aa. (261 aa)
BP3759Mce related protein; Similar to Pseudomonas putida toluene tolerance protein Ttg2C TR:Q9Z400 (EMBL:AF106002) (161 aa) fasta scores: E(): 4.7e-22, 46.54% id in 159 aa, and to Neisseria meningitidis putative outer membrane transport protein NMA0487 TR:Q9JR43 (EMBL:AL162753) (164 aa) fasta scores: E(): 3.3e-28, 53.04% id in 164 aa. (168 aa)
BP3760Similar to Shigella flexneri lipoprotein required for intercellular spreading, VacJ SW:VACJ_SHIFL (P43262) (251 aa) fasta scores: E(): 2e-22, 35.77% id in 246 aa, and to Pseudomonas aeruginosa hypothetical protein PA2800 TR:Q9I043 (EMBL:AE004707) (234 aa) fasta scores: E(): 1.7e-27, 40.26% id in 231 aa. (263 aa)
BP3761Putative exported protein; Similar to Neisseria meningitidis putative periplasmic transport protein NMA0488 TR:Q9JW92 (EMBL:AL162753) (196 aa) fasta scores: E(): 4.3e-16, 33.82% id in 204 aa, and to Escherichia coli hypothetical protein YrbC SW:YRBC_ECOLI (P45390) (211 aa) fasta scores: E(): 1.8e-12, 29.41% id in 204 aa. (207 aa)
BP3864Putative membrane protein; Similar to an internal region of Rattus norvegicus monocarboxylate transporter 4 MCT4 SW:MOT4_RAT (O35910) (471 aa) fasta scores: E(): 0.002, 24.23% id in 425 aa, and to the full length Pseudomonas aeruginosa hypothetical protein PA2589 TR:Q9I0P8 (EMBL:AE004687) (404 aa) fasta scores: E(): 4.2e-07, 26.05% id in 403 aa. Possible alternative translational start site. (412 aa)
Your Current Organism:
Bordetella pertussis
NCBI taxonomy Id: 257313
Other names: B. pertussis Tohama I, Bordetella pertussis Tohama I
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