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BP0025 BP0025 BP0026 BP0026 BP0027 BP0027 BP0029 BP0029 BP0143 BP0143 BP0144 BP0144 BP0145 BP0145 BP0217 BP0217 BP0229 BP0229 BP0299 BP0299 BP0309 BP0309 BP0310 BP0310 BP0311 BP0311 BP0313 BP0313 BP0417 BP0417 BP0420 BP0420 BP0421 BP0421 BP0422 BP0422 BP0435 BP0435 BP0436 BP0436 aceK aceK accB accB accA accA BP0534 BP0534 hmgcL hmgcL BP0625 BP0625 BP0627 BP0627 BP0633 BP0633 BP0634 BP0634 BP0635 BP0635 BP0636 BP0636 BP0637 BP0637 BP0638 BP0638 BP0639 BP0639 BP0640 BP0640 BP0641 BP0641 BP0642 BP0642 BP0652 BP0652 BP0653 BP0653 BP0668 BP0668 BP0669 BP0669 BP0670 BP0670 etfB etfB etfA etfA BP0964 BP0964 gcdH gcdH BP1702 BP1702 BP1779 BP1779 BP1780 BP1780 BP1781 BP1781 BP1782 BP1782 BP1783 BP1783 BP1784 BP1784 fabG-3 fabG-3 paaG paaG BP2059 BP2059 BP2099 BP2099 BP2100 BP2100 BP2400 BP2400 BP2403 BP2403 BP2454 BP2454 BP2550 BP2550 fabG-5 fabG-5 BP2555 BP2555 BP2556 BP2556 BP2557 BP2557 BP2558 BP2558 BP2559 BP2559 BP2941 BP2941 BP2943 BP2943 BP2944 BP2944 BP3198 BP3198 BP3199 BP3199 BP3201 BP3201 BP3277 BP3277 BP3304 BP3304 BP3305 BP3305 BP3306 BP3306 BP3307 BP3307 BP3308 BP3308 BP3317 BP3317 BP3695 BP3695 BP3844 BP3844 BP3847 BP3847 BP3848 BP3848 BP3849 BP3849
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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a 3D structure is known or predicted
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BP0025Putative racemase (Pseudogene); Pseudogene. This CDS is disrupted by the insertion of IS481 element. Similar to Rhodococcus spAD45 putative racemase IsoG TR:Q9RBP6 (EMBL:AJ249207) (405 aa) fasta scores: E(): 3.3e-16, 45.370% id in 108 aa, and to Thermoplasma volcanium L-carnitine dehydratase TVG1215416 TR:BAB60328 (EMBL:AP000995) (399 aa) fasta scores: E(): 1.7e-14, 41.509% id in 106 aa. Similar to N-terminal regions of several CDSs including BP0416, BP3709, BP0253, BP3318, BP0199. (144 aa)
BP0026Putative thiolase; Similar to Mycobacterium tuberculosis CDC1551 nonspecific lipid-transfer protein mt1663 TR:AAK45933 (EMBL:AE007030) (402 aa) fasta scores: E(): 5.1e-14, 27.229% id in 415 aa, and to Pseudomonas fluorescens PhlC TR:Q51727 (EMBL:U41818) (398 aa) fasta scores: E(): 5.2e-15, 27.188% id in 320 aa. (408 aa)
BP0027MaoC family protein; Similar to Archaeoglobus fulgidus MaoC protein af2313 TR:O27971 (EMBL:AE000944) (151 aa) fasta scores: E(): 3.3e-19, 46.154% id in 143 aa, and to Rhodococcus spNCIMB 9784. fad-binding protein CampD TR:AAK50623 (EMBL:AF323755) (167 aa) fasta scores: E(): 2.4e-12, 33.562% id in 146 aa. (165 aa)
BP0029Similar to Deinococcus radiodurans enoyl-CoA hydratase, putative DR0184 TR:Q9RXX1 (EMBL:AE001881) (273 aa) fasta scores: E(): 8e-50, 52.209% id in 249 aa, and to Mycobacterium tuberculosis enoyl-CoA hydratase EchA15 or RV2679 or MTV010.03 TR:O53232 (EMBL:AL021186) (276 aa) fasta scores: E(): 6e-48, 49.621% id in 264 aa. Similar to BP3304, 51.331% identity in 263 aa overlap. (263 aa)
BP0143Conserved hypothetical protein; Identical to the N-terminal region of Bordetella pertussis hypothetical 29.3 kDa protein TR:O30450 (EMBL:AF006000) (273 aa) fasta scores: E(): 9.8e-105, 100.000% id in 273 aa, and similar to Pseudomonas aeruginosa hypothetical protein PA0446 TR:Q9I672 (EMBL:AE004482) (407 aa) fasta scores: E(): 2.7e-92, 57.248% id in 407 aa. Also similar to BP1779 (68.059% identity in 407 aa overlap), and BP3309 (57.143% identity in 399 aa overlap); Belongs to the CoA-transferase III family. (407 aa)
BP0144Putative lipase; This CDS start with an isoleucine, whereas parapertussis and bronchiseptica start with a methionine. The sequence has been checked and believed to be correct. Identical to the previously sequenced Bordetella pertussis hypothetical 34.3 kDa protein TR:O30449 (EMBL:AF006000) (324 aa) fasta scores: E(): 2.8e-116, 100.000% id in 303 aa, and to Acinetobacter spSE19. acetyl-hydrolase chnC TR:Q9F7D7 (EMBL:AF282240) (300 aa) fasta scores: E(): 1.8e-28, 34.507% id in 284 aa. Also similar to BP2097, 39.583% identity in 288 aa overlap. (310 aa)
BP0145Putative enoyl-CoA hydratase/isomerase; Identical to the previously sequenced Bordetella pertussis hypothetical 29.5 kDa protein TR:O30448 (EMBL:AF006000) (270 aa) fasta scores: E(): 3e-109, 100.000% id in 270 aa, and similar to Escherichia coli naphthoate synthase MenB or B2262 SW:MENB_ECOLI (P27290) (285 aa) fasta scores: E(): 3.5e-20, 33.969% id in 262 aa. (270 aa)
BP0217Similar to Clostridium acetobutylicum 3-hydroxybutyryl-CoA dehydrogenase Hbd or Cac2708 SW:HBD_CLOAB (P52041) (282 aa) fasta scores: E(): 7.6e-33, 42.199% id in 282 aa, and to Rhizobium loti 3-hydroxybutyryl-CoA dehydrogenase Mlr6793 TR:Q988C8 (EMBL:AP003010) (309 aa) fasta scores: E(): 3.7e-37, 36.452% id in 310 aa. (310 aa)
BP0229Similar to Pseudomonas putida beta-D-hydroxybutyrate dehydrogenase BdhA TR:Q9AE70 (EMBL:AJ310211) (256 aa) fasta scores: E(): 1.6e-35, 45.349% id in 258 aa, and to Pseudomonas SpGM101 beta-hydroxybutyrate dehydrogenase HbdH TR:Q9KH52 (EMBL:AF271714) (255 aa) fasta scores: E(): 2.1e-35, 45.736% id in 258 aa. (265 aa)
BP0299MarR-family transcriptional regulator; Similar to Rhodopseudomonas palustris transcriptional activatory protein BadR SW:BADR_RHOPA (O07458) (175 aa) fasta scores: E(): 7.3e-06, 28.873% id in 142 aa, and to Rhizobium loti transcriptional regulator Mll5432 TR:Q98BT7 (EMBL:AP003006) (156 aa) fasta scores: E(): 6.6e-22, 48.905% id in 137 aa. (167 aa)
BP0309Probable short chain dehydrogenase (Pseudogene); HMMPfam hit to PF00678; Belongs to the enoyl-CoA hydratase/isomerase family. (287 aa)
BP0310Similar to Azoarcus evansii putative acyl-CoA dehydrogenase TR:AAL02066 (EMBL:AF320253) (404 aa) fasta scores: E(): 2.7e-99, 71.318% id in 387 aa, and to Thauera aromatica putative acyl-CoA dehydrogenase TR:Q9AJS9 (EMBL:AJ278289) (388 aa) fasta scores: E(): 3e-95, 67.700% id in 387 aa. (389 aa)
BP0311Probable acid-coenzyme A ligase; Similar to Rhodopseudomonas palustris benzoate-coenzyme A ligase BadA TR:Q59760 (EMBL:L42322) (521 aa) fasta scores: E(): 1.1e-49, 34.990% id in 523 aa, and to Azoarcus evansii 2-aminobenzoate-CoA ligase TR:AAL02069 (EMBL:AF320253) (542 aa) fasta scores: E(): 5.2e-121, 58.165% id in 545 aa. (549 aa)
BP0313Similar to Azoarcus evansii hypothetical 14.6 kDa protein TR:AAL02075 (EMBL:AF320254) (132 aa) fasta scores: E(): 3e-28, 55.303% id in 132 aa, and to Rhizobium loti Mll5429 protein TR:Q98BU0 (EMBL:AP003006) (137 aa) fasta scores: E(): 3.2e-31, 62.879% id in 132 aa. (133 aa)
BP0417Similar to Escherichia coli probable enoyl-CoA hydratase PaaG or B1394 SW:PAAG_ECOLI (P77467) (262 aa) fasta scores: E(): 1.7e-20, 34.221% id in 263 aa, and to Pseudomonas putida PhaB TR:O84979 (EMBL:AF029714) (263 aa) fasta scores: E(): 9.8e-21, 33.468% id in 248 aa. (261 aa)
BP0420Similar to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase Pa1022 TR:Q9I4V2 (EMBL:AE004534) (381 aa) fasta scores: E(): 2.4e-29, 33.159% id in 383 aa, and to Mycobacterium tuberculosis CDC1551 acyl-CoA dehydrogenase, putative Mt3665 TR:AAK48023 (EMBL:AE007168) (385 aa) fasta scores: E(): 5.6e-27, 33.508% id in 382 aa. (386 aa)
BP0421Putative acyl-CoA dehydrogenase; Similar to Mycobacterium tuberculosis CDC1551 acyl-CoA dehydrogenase, putative Mt3669 TR:AAK48027 (EMBL:AE007168) (318 aa) fasta scores: E(): 1.4e-09, 30.132% id in 302 aa, and to Streptomyces coelicolor putative acyl-CoA dehydrogenase Scf37.28C TR:Q9RJX3 (EMBL:AL133210) (362 aa) fasta scores: E(): 2.6e-05, 28.691% id in 359 aa. (342 aa)
BP0422Probable thiolase; Similar to Alcaligenes eutrophus acetyl-CoA acetyltransferase PhbA SW:THIL_ALCEU (P14611) (393 aa) fasta scores: E(): 1.5e-60, 46.530% id in 389 aa, and to Rhizobium meliloti probable thiolase Sma1450 TR:AAK65449 (EMBL:AE007266) (396 aa) fasta scores: E(): 7e-83, 60.870% id in 391 aa. Also similar to BP0447 (53.684% identity in 380 aa overlap); Belongs to the thiolase-like superfamily. Thiolase family. (397 aa)
BP0435Putative exported protein (Pseudogene); Signal peptide predicted for BP0454 by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.995 between residues 21 and 22; Belongs to the CoA-transferase III family. (410 aa)
BP0436Conserved hypothetical protein; Similar to Salmonella enteritidis FkbR2 =TR:AAK97549 (EMBL:AF376036) (175 aa) fasta scores: E(): 1.7e-27, 55.634% id in 142 aa, and to Streptomyces hygroscopicus varascomyceticus FkbR2 TR:Q9KIF1 (EMBL:AF235504) (175 aa) fasta scores: E(): 7e-27, 52.055% id in 146 aa. (164 aa)
aceKIsocitrate dehydrogenase kinase/phosphatase (Pseudogene); In-frame TAG stop codon in pertussis; GAC in parapertussis and bronchiseptica; Belongs to the thiolase-like superfamily. Thiolase family. (389 aa)
accBSimilar to Myxococcus xanthus acetyl-CoA carboxylase carboxyltransferase AccB TR:Q9FAF6 (EMBL:AB039884) (538 aa) fasta scores: E(): 1.7e-93, 47.330% id in 543 aa, and to Homo sapiens 3-methylcrotonyl-Coa carboxylase subunit MccB TR:AAK49409 (EMBL:AF261884) (563 aa) fasta scores: E(): 8.1e-142, 68.182% id in 528 aa. (537 aa)
accASimilar to Myxococcus xanthus acetyl-Coa Carboxylase biotin carboxylase subunit AccA TR:Q9FAF5 (EMBL:AB039884) (573 aa) fasta scores: E(): 8.6e-85, 46.667% id in 570 aa, and to Escherichia coli biotin carboxylase AccC or FabG or B3256 SW:ACCC_ECOLI (P24182) (449 aa) fasta scores: E(): 6.6e-76, 51.106% id in 452 aa. Also similar to BP0889 (50.224% identity in 446 aa overlap), and BP2996 (47.903% identity in 453 aa overlap). (673 aa)
BP0534Probable enoyl-CoA hydratase/isomerase; Similar to Clostridium acetobutylicum 3-hydroxybutyryl-CoA dehydratase Crt or Cac2712 SW:CRT_CLOAB (P52046) (261 aa) fasta scores: E(): 1.8e-17, 31.624% id in 234 aa, and to Sulfolobus solfataricus enoyl CoA hydratase Orf-C09_013 or Paaf-2 TR:Q9UX44 (EMBL:Y18930) (252 aa) fasta scores: E(): 2.7e-17, 29.279% id in 222 aa. (254 aa)
hmgcLSimilar to Gallus gallus hydroxymethylglutaryl-CoA lyase HmgcL SW:HMGL_CHICK (P35915) (298 aa) fasta scores: E(): 1.8e-60, 54.452% id in 292 aa, and to Pseudomonas aeruginosa hydroxymethylglutaryl-CoA lyase Pa2011 TR:Q9I2A0 (EMBL:AE004627) (300 aa) fasta scores: E(): 1.5e-63, 58.863% id in 299 aa. Also similar to BP3695, 42.657% identity in 286 aa overlap. (302 aa)
BP0625Probable acyl-CoA dehydrogenase; Similar to Pseudomonas putida FadfX TR:Q9AHX9 (EMBL:AF290950) (375 aa) fasta scores: E(): 8.8e-34, 33.425% id in 362 aa, and to Archaeoglobus fulgidus acyl-CoA dehydrogenase Af0964 TR:O29298 (EMBL:AE001038) (394 aa) fasta scores: E(): 5.4e-66, 44.810% id in 395 aa. (391 aa)
BP0627ScanRegExp hit to PS00189, 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. Confirmed by InterPro eMOTIF pattern match. (261 aa)
BP0633C-terminus truncated putative pimeloyl-CoA synthetase (Pseudogene); HMMPfam hit to PF02629, CoA binding domain. (330 aa)
BP0634Similar to Bacillus subtilis acyl-CoA dehydrogenase AcdA or Acd SW:ACDA_BACSU (P45867) (379 aa) fasta scores: E(): 1.1e-49, 40.849% id in 377 aa, and to Bacillus halodurans acyl-CoA dehydrogenase AcdA or Bh3798 TR:Q9K6D1 (EMBL:AP001520) (380 aa) fasta scores: E(): 5.8e-53, 41.270% id in 378 aa. (382 aa)
BP0635Similar to Escherichia coli probable enoyl-CoA hydratase PaaG or B1394 SW:PAAG_ECOLI (P77467) (262 aa) fasta scores: E(): 5.2e-25, 33.846% id in 260 aa, and to Rhizobium meliloti putative enoyl-CoA hydratase protein TR:CAC49952 (EMBL:AL603647) (263 aa) fasta scores: E(): 8.5e-28, 39.147% id in 258 aa; Belongs to the enoyl-CoA hydratase/isomerase family. (268 aa)
BP0636Conserved hypothetical protein; Similar to Rhodococcus spNCIMB 9784 non-specific lipid carrier-like protein CampC TR:AAK50624 (EMBL:AF323755) (408 aa) fasta scores: E(): 8.1e-37, 35.106% id in 376 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1016 TR:Q9I4V7 (EMBL:AE004534) (383 aa) fasta scores: E(): 2.1e-46, 41.425% id in 379 aa. (384 aa)
BP0637Similar to Thermoplasma volcanium hypothetical protein Tvg0142586 TR:Q97CG7 (EMBL:AP000991) (135 aa) fasta scores: E(): 1.1e-07, 36.522% id in 115 aa, and to Archaeoglobus fulgidus conserved hypothetical protein Af0284 TR:O29957 (EMBL:AE001085) (165 aa) fasta scores: E(): 2.2e-06, 29.091% id in 110 aa. (133 aa)
BP0638Hypothetical protein; No significant database matches. (131 aa)
BP0639Conserved hypothetical protein; Similar to Archaeoglobus fulgidus monoamine oxidase regulatory protein, putative Af0198 TR:O30041 (EMBL:AE001092) (146 aa) fasta scores: E(): 6.9e-07, 44.444% id in 90 aa, and to Archaeoglobus fulgidus conserved hypothetical protein Af1124 TR:O29141 (EMBL:AE001026) (159 aa) fasta scores: E(): 1.6e-06, 28.182% id in 110 aa. (130 aa)
BP0640Probable acyl-CoA dehydrogenase; Similar to Pseudomonas putida FadfX TR:Q9AHX9 (EMBL:AF290950) (375 aa) fasta scores: E(): 3.6e-38, 33.858% id in 381 aa, and to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase Pa2889 TR:Q9HZV8 (EMBL:AE004715) (386 aa) fasta scores: E(): 6.2e-86, 55.584% id in 385 aa. (386 aa)
BP0641Putative exported protein; Similar to Rhizobium meliloti conserved hypothetical protein Sma1927 TR:AAK65716 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.5e-40, 40.000% id in 315 aa, and to Agrobacterium tumefaciens Agr_l_312p TR:AAK88723 (EMBL:AE008213) (329 aa) fasta scores: E(): 4.7e-39, 40.312% id in 320 aa. (323 aa)
BP0642Similar to Pseudomonas aeruginosa hypothetical protein Pa3592 TR:Q9HY34 (EMBL:AE004779) (395 aa) fasta scores: E(): 1.9e-30, 35.567% id in 388 aa, and to Rhodococcus erythropolis putative dehydratase/racemase TR:Q9AH11 (EMBL:AF323606) (400 aa) fasta scores: E(): 8.9e-30, 32.626% id in 377 aa; Belongs to the CoA-transferase III family. (382 aa)
BP0652Similar to Caulobacter crescentus acyl-CoA dehydrogenase family protein Cc1311 TR:Q9A8P2 (EMBL:AE005806) (401 aa) fasta scores: E(): 2.8e-46, 40.476% id in 378 aa, and to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase Pa0746 TR:Q9I5I3 (EMBL:AE004509) (387 aa) fasta scores: E(): 3.9e-26, 31.622% id in 370 aa. (376 aa)
BP0653Similar to Caulobacter crescentus acyl-CoA dehydrogenase family protein Cc1310 TR:Q9A8P3 (EMBL:AE005806) (404 aa) fasta scores: E(): 2e-81, 50.495% id in 404 aa, and to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase Pa1022 TR:Q9I4V2 (EMBL:AE004534) (381 aa) fasta scores: E(): 2e-46, 41.582% id in 392 aa. (396 aa)
BP0668Probable thiolase; Similar to Cucurbita maxima 3-ketoacyl-CoA thiolase precursor TR:P93112 (EMBL:D70895) (461 aa) fasta scores: E(): 1.1e-50, 42.569% id in 397 aa, and to Deinococcus radiodurans acetyl-CoA acetyltransferase Dr1428 TR:Q9RUF8 (EMBL:AE001987) (402 aa) fasta scores: E(): 4.6e-94, 65.140% id in 393 aa; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
BP0669Probable enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase, bifunctional enzyme; Similar to Cavia porcellus peroxisomal bifunctional enzyme EhhadH SW:ECHP_CAVPO (P55100) (725 aa) fasta scores: E(): 1.9e-65, 41.018% id in 707 aa, and to Rhizobium loti enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase Nll4199 TR:Q98EK7 (EMBL:AP003003) (689 aa) fasta scores: E(): 6.5e-103, 46.802% id in 688 aa. (705 aa)
BP0670Probable acyl-CoA dehydrogenase; Similar to Escherichia coli AidB protein B4187 SW:AIDB_ECOLI (P33224) (541 aa) fasta scores: E(): 1.4e-32, 30.983% id in 468 aa, and to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase Pa3593 TR:Q9HY33 (EMBL:AE004779) (575 aa) fasta scores: E(): 7.1e-91, 47.120% id in 573 aa. (600 aa)
etfBSimilar to Bradyrhizobium japonicum electron transfer flavoprotein beta-subunit EtfB or EtfS SW:ETFB_BRAJA (P53575) (249 aa) fasta scores: E(): 9.4e-59, 69.076% id in 249 aa, and to Pseudomonas aeruginosa electron transfer flavoprotein beta-subunit EtfB or Pa2952 TR:Q9HZP6 (EMBL:AE004721) (249 aa) fasta scores: E(): 3.5e-62, 74.297% id in 249 aa. (249 aa)
etfASimilar to Bradyrhizobium japonicum electron transfer flavoprotein alpha-subunit EtfA or EtfL SW:ETFA_BRAJA (P53573) (314 aa) fasta scores: E(): 4.3e-64, 68.065% id in 310 aa, and to Pseudomonas aeruginosa electron transfer flavoprotein alpha-subunit EtfA or Pa2951 TR:Q9HZP7 (EMBL:AE004721) (309 aa) fasta scores: E(): 2.5e-67, 70.550% id in 309 aa. (309 aa)
BP0964Similar to Rhizobium loti probable acyl-CoA dehydrogenase Mlr6975 TR:Q987P3 (EMBL:AP003010) (583 aa) fasta scores: E(): 2.9e-96, 50.984% id in 610 aa, and to Rhizobium meliloti putative acyl-CoA dehydrogenase protein Smc00977 TR:CAC45447 (EMBL:AL591785) (593 aa) fasta scores: E(): 1.2e-95, 48.571% id in 595 aa. (608 aa)
gcdHSimilar to Mus musculus glutaryl-CoA dehydrogenase, mitochondrial precursor GcdH SW:GCDH_MOUSE (Q60759) (438 aa) fasta scores: E(): 3.4e-105, 65.99% id in 397 aa, and to Pseudomonas aeruginosa glutaryl-CoA dehydrogenase GcdH or Pa0447 TR:Q9I671 (EMBL:AE004482) (393 aa) fasta scores: E(): 1.1e-138, 84.38% id in 397 aa. (397 aa)
BP1702Similar to Pseudomonas aeruginosa probable enoyl-CoA hydratase/isomerase Pa2013 TR:Q9I298 (EMBL:AE004627) (265 aa) fasta scores: E(): 2.1e-37, 41.06% id in 263 aa, and to Caulobacter crescentus enoyl-CoA hydratase/isomerase family protein Cc2169 TR:Q9A6C5 (EMBL:AE005888) (262 aa) fasta scores: E(): 3.4e-38, 44.22% id in 251 aa. (264 aa)
BP1779Similar to Pseudomonas aeruginosa hypothetical protein Pa0446 TR:Q9I672 (EMBL:AE004482) (407 aa) fasta scores: E(): 7.6e-94, 56.71% id in 402 aa, and to Acinetobacter spNCIMB9871 L-carnitine dehydrogenase-like protein Orf17 TR:BAB61747 (EMBL:AB026669) (405 aa) fasta scores: E(): 4.3e-82, 51.11% id in 405 aa. Also similar to BP0143 (68.059% identity in 407 aa overlap), and BP3309 (57.644% identity in 399 aa overlap); Belongs to the CoA-transferase III family. (407 aa)
BP1780Putative exported protein; Similar to Comamonas testosteroni Orf4 protein TR:Q9S155 (EMBL:AB024335) (325 aa) fasta scores: E(): 6.8e-40, 39.93% id in 313 aa, and to Variovorax paradoxus, and 2,4-diphenoxyacetic acid gene cluster TR:AAK81675 (EMBL:AB028643) (337 aa) fasta scores: E(): 1.7e-32, 35.57% id in 312 aa. (323 aa)
BP1781Conserved hypothetical protein; Similar to Rhizobium leguminosarum nodulation protein N NodN SW:NODN_RHILV (P08634) (161 aa) fasta scores: E(): 4e-18, 43.84% id in 130 aa, and to Mycobacterium tuberculosis hypothetical 16.0 kDa protein rv0130 or mtci5.04 TR:P96807 (EMBL:Z92770) (151 aa) fasta scores: E(): 6.5e-20, 48.43% id in 128 aa. (133 aa)
BP1782Similar to Escherichia coli probable enoyl-CoA hydratase PaaG or B1394 SW:PAAG_ECOLI (P77467) (262 aa) fasta scores: E(): 4e-24, 38.79% id in 250 aa, and to Caulobacter crescentus enoyl-CoA hydratase/isomerase family protein cc2575 TR:Q9A582 (EMBL:AE005925) (265 aa) fasta scores: E(): 4.2e-25, 35.84% id in 265 aa. (265 aa)
BP1783Conserved hypothetical protein; Similar to Pyrococcus abyssi AcaC protein or Pab0908 TR:Q9UYY6 (EMBL:AJ248287) (134 aa) fasta scores: E(): 1.3e-05, 29.83% id in 124 aa, and to Archaeoglobus fulgidus conserved hypothetical protein Af1292 TR:O28977 (EMBL:AE001015) (136 aa) fasta scores: E(): 3.8e-05, 29.66% id in 118 aa. (143 aa)
BP1784Putative thiolase; Similar to Pseudomonas aeruginosa hypothetical protein Pa1016 TR:Q9I4V7 (EMBL:AE004534) (383 aa) fasta scores: E(): 7.5e-88, 60.31% id in 378 aa, and to Methanothermobacter thermautotrophicus lipid-transfer protein Mth793 TR:O26884 (EMBL:AE000857) (383 aa) fasta scores: E(): 8e-31, 32.03% id in 384 aa. (385 aa)
fabG-3Similar to Escherichia coli 3-oxoacyl-[acyl-carrier protein] reductase FabG or B1093 SW:FABG_ECOLI (P25716) (244 aa) fasta scores: E(): 3.3e-24, 36.69% id in 248 aa, and to Thermotoga maritima 3-oxoacyl-[acyl-carrier protein] reductase FabG or Tm1724 SW:FABG_THEMA (Q9X248) (246 aa) fasta scores: E(): 2.2e-27, 41.5% id in 253 aa. (258 aa)
paaGSimilar to Escherichia coli probable enoyl-CoA hydratase PaaG or B1394 SW:PAAG_ECOLI (P77467) (262 aa) fasta scores: E(): 2.3e-24, 38.79% id in 250 aa, and to Rhizobium meliloti putative enoyl-CoA hydratase protein TR:Q92TG7 (EMBL:AL603647) (263 aa) fasta scores: E(): 7.3e-25, 37.73% id in 265 aa; Belongs to the enoyl-CoA hydratase/isomerase family. (269 aa)
BP2059Putative thiolase; Similar to many thioloases e.g. Alcaligenes eutrophus beta-ketothiolase bktB TR:O68275 (EMBL:AF026544) (394 aa) fasta scores: E(): 3.1e-106, 75.897% id in 390 aa and Clostridium acetobutylicum acetyl-CoA acetyltransferase thl or CAC2873 SW:THL_CLOAB (P45359) (392 aa) fasta scores: E(): 8.6e-70, 52.051% id in 390 aa; Belongs to the thiolase-like superfamily. Thiolase family. (395 aa)
BP2099Similar to many putative thiolases e.g. Caulobacter crescentus thiolase family protein CC1432 TR:Q9A8C2 (EMBL:AE005818) (400 aa) fasta scores: E(): 1.5e-111, 67.929% id in 396 aa; Belongs to the thiolase-like superfamily. Thiolase family. (398 aa)
BP2100Similar to Caulobacter crescentus hypothetical protein CC1431 TR:Q9A8C3 (EMBL:AE005818) (488 aa) fasta scores: E(): 3e-65, 44.136% id in 469 aa. (495 aa)
BP2400Similar to Deinococcus radiodurans CoA transferase, subunit B dra0067 TR:Q9RZ87 (EMBL:AE001862) (209 aa) fasta scores: E(): 6.4e-61, 80.09% id in 211 aa, and to Helicobacter pylori succinyl-coa:3-ketoacid-coenzyme A transferase subunit B ScoB or hp0692 SW:SCOB_HELPY (P56007) (207 aa) fasta scores: E(): 2.8e-44, 60.76% id in 209 aa. Also similar to BP1789 (46.667% identity in 210 aa overlap), and to BP222 (49.756% identity in 205 aa overlap). (217 aa)
BP2403Putative electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. (542 aa)
BP2454Putative oxidoreductase; Similar to Alcaligenes eutrophus D-beta-hydroxybutyrate dehydrogenase HbdH1 SW:BDHA_ALCEU (Q9X6U2) (258 aa) fasta scores: E(): 7.9e-57, 63.84% id in 260 aa and to Rhizobium meliloti D-beta-hydroxybutyrate dehydrogenase BdhA or Rb1136 or Smb21010 SW:BDHA_RHIME (O86034) (258 aa) fasta scores: E(): 1e-45, 54.29% id in 256 aa. (260 aa)
BP2550Putative enoyl-CoA hydratase; Similar to Sulfolobus tokodaii 254aa long hypothetical enoyl-CoA hydratase St0048 TR:BAB65003 (EMBL:AP000981) (254 aa) fasta scores: E(): 1e-16, 32.959% id in 267 aa, and to Mycobacterium tuberculosis probable enoyl-CoA hydratase Echa8 or Rv1070c or Mt1100 or Mtv017.23C SW:ECH8_MYCTU (O53418) (257 aa) fasta scores: E(): 1e-16, 28.409% id in 264 aa. (264 aa)
fabG-5Similar to Escherichia coli 3-oxoacyl-[acyl-carrier protein] reductase FabG or B1093 SW:FABG_ECOLI (P25716) (244 aa) fasta scores: E(): 3.5e-29, 41.597% id in 238 aa. (248 aa)
BP2555Conserved hypothetical protein; Similarover the whole range to proteins of unproven function e.g. Archaeoglobus fulgidus MaoC protein af2313 TR:O27971 (EMBL:AE000944) (151 aa) fasta scores: E(): 1.3e-13, 40.000% id in 130 aa. Similar to the the very C-terminus of Escherichia coli phenylacetic acid degradation protein MaoC SW:MAOC_ECOLI (P77455) (681 aa) fasta scores: E(): 1.6e-08, 35.821% id in 134 aa. (147 aa)
BP2556Weakly similar to many proteins of undefined function e.g. Thermoplasma acidophilum hypothetical protein Ta1457 ta1457 TR:Q9HI85 (EMBL:AL445067) (135 aa) fasta scores: E(): 0.018, 25.210% id in 119 aa. (130 aa)
BP2557Conserved hypothetical protein; Similar to many e.g. Pseudomonas aeruginosa hypothetical protein Pa1016 TR:Q9I4V7 (EMBL:AE004534) (383 aa) fasta scores: E(): 2.6e-46, 43.669% id in 387 aa. (387 aa)
BP2558LysR-family transcriptional regulator; Similar to many e.g. Escherichia coli, and glycine cleavage system transcriptional activator GcvA or B2808 or Z4125 or Ecs3668 SW:GCVA_ECOLI (P32064) (305 aa) fasta scores: E(): 1.3e-22, 30.208% id in 288 aa; Belongs to the LysR transcriptional regulatory family. (295 aa)
BP2559Hypothetical protein; Similar to many e.g. Escherichia coli hypothetical protein YfdE or B2371 SW:YFDE_ECOLI (P76518) (381 aa) fasta scores: E(): 5.3e-53, 37.333% id in 375 aa; Belongs to the CoA-transferase III family. (395 aa)
BP2941Putative racemase; Similar to Streptomyces coelicolor putative racemase Sc5f2a.13 TR:Q9X7N6 (EMBL:AL049587) (398 aa) fasta scores: E(): 1e-70, 55.22% id in 364 aa, and to Mycobacterium tuberculosis CDC1551 fatty acid-coA racemase Mt1176 TR:AAK45435 (EMBL:AE006996) (395 aa) fasta scores: E(): 3.7e-69, 51.16% id in 387 aa; Belongs to the CoA-transferase III family. (396 aa)
BP2943Putative exported protein; Similar to several proteins of undefined function e.g. Comamonas testosteroni OrfJ protein TR:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 8.5e-43, 42.02% id in 326 aa and to Rhizobium meliloti hypothetical protein Sma1927 TR:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 5e-40, 38.58% id in 324 aa. (329 aa)
BP2944Weakly similar to Sulfolobus tokodaii hypothetical protein St0068 TR:BAB65025 (EMBL:AP000981) (165 aa) fasta scores: E(): 4.8e-09, 30.87% id in 149 aa and to Rhodococcus sp NCIMB 9784 FAD-binding protein CampD TR:AAK50623 (EMBL:AF323755) (167 aa) fasta scores: E(): 1.2e-07, 32.41% id in 145 aa. (155 aa)
BP3198ScanRegExp hit to PS00061, Short-chain dehydrogenases/reductases family signature; Belongs to the enoyl-CoA hydratase/isomerase family. (260 aa)
BP3199Similar to Sulfolobus solfataricus hypothetical protein SSO2626 TR:Q97VJ8 (EMBL:AE006858) (128 aa) fasta scores: E(): 3.4e-05, 28.15% id in 103 aa. (129 aa)
BP3201Putative thiolase (Pseudogene); GCAT in pertussis; GC(GCGCGCCTGTCG)AT. (287 aa)
BP3277Putative enoyl-CoA hydratase; Similar to Rhizobium meliloti probable enoyl-CoA hydratase FadB1 or r00366 or smc01153 SW:ECHH_RHIME (Q52995) (257 aa) fasta scores: E(): 5.4e-62, 68.6% id in 258 aa, and to Homo sapiens enoyl-CoA hydratase, mitochondrial precursor EchS1 SW:ECHM_HUMAN (P30084) (290 aa) fasta scores: E(): 2.9e-48, 54.11% id in 255 aa; Belongs to the enoyl-CoA hydratase/isomerase family. (275 aa)
BP3304Putative enoyl-CoA hydratase; Similar to Mycobacterium tuberculosis enoyl-CoA hydratase EchA15 or Rv2679 or Mtv010.03 TR:O53232 (EMBL:AL021186) (276 aa) fasta scores: E(): 7.6e-60, 59.1% id in 269 aa, and to Escherichia coli probable enoyl-CoA hydratase PaaG or b1394 SW:PAAG_ECOLI (P77467) (262 aa) fasta scores: E(): 2.7e-15, 29.11% id in 261 aa. Similar to BP0029, 51.331% identity in 263 aa overlap; Belongs to the enoyl-CoA hydratase/isomerase family. (273 aa)
BP3305Similar to Caulobacter crescentus enoyl-CoA hydratase/isomerase family protein cc0397 TR:Q9AB37 (EMBL:AE005712) (256 aa) fasta scores: E(): 4.8e-33, 46.41% id in 237 aa, and to Mus musculus peroxisomal 3,2-trans-enoyl-CoA isomerase PecI SW:PECI_MOUSE (Q9WUR2) (358 aa) fasta scores: E(): 4.6e-20, 34.13% id in 249 aa. (245 aa)
BP3306Similar to many eg. Rhizobium meliloti hypothetical protein Smc02150 TR:CAC41942 (EMBL:AL591783) (336 aa) fasta scores: E(): 8.8e-66, 57.37% id in 312 aa. (330 aa)
BP3307Putative TetR-family trasncriptional regulator; Similar to many eg. Rhodococcus spNCIMB 9784. transcriptional repressor CamPR TR:AAK50621 (EMBL:AF323755) (206 aa) fasta scores: E(): 4.3e-13, 30.69% id in 202 aa. (207 aa)
BP3308Putative acyl-CoA dehydrogenase; Similar to many eg. Pseudomonas aeruginosa probable acyl-CoA dehydrogenase Pa1631 TR:Q9I391 (EMBL:AE004590) (384 aa) fasta scores: E(): 2.1e-106, 70.6% id in 381 aa, and to Clostridium acetobutylicum acyl-CoA dehydrogenase, short-chain specific Bcd or Cac2711 SW:ACDS_CLOAB (P52042) (379 aa) fasta scores: E(): 3.3e-46, 38.91% id in 370 aa. (382 aa)
BP3317Putative enoyl-CoA hydratase/isomerase; Similar to Mycobacterium tuberculosis probable enoyl-CoA hydratase EchA6 or Rv0905 or Mt0928 or mtcy31.33 SW:ECH6_MYCTU (Q10533) (243 aa) fasta scores: E(): 2.9e-11, 34.41% id in 215 aa. (241 aa)
BP3695Conserved hypothetical protein (pseudogene); (AG)2 in pertussis; (AG)1 in parapertussis and bronchiseptica. (315 aa)
BP3844Putative enoyl-CoA hydratase/isomerase; Similar to Archaeoglobus fulgidus enoyl-CoA hydratase AF0963 TR:O29299 (EMBL:AE001038) (259 aa) fasta scores: E(): 1.4e-25, 36.51% id in 241 aa, and to Bacillus subtilis putative hydroxybutyryl-dehydratase FenO TR:Q9L7W1 (EMBL:AF218939) (260 aa) fasta scores: E(): 1.6e-25, 35.84% id in 265 aa; Belongs to the enoyl-CoA hydratase/isomerase family. (274 aa)
BP3847Similar to Homo sapiens mitochondrial hydroxymethylglutaryl-CoA lyase precursor HMGCL SW:HMGL_HUMAN (P35914) (325 aa) fasta scores: E(): 4.7e-18, 35.94% id in 306 aa, and to Pseudomonas mevalonii hydroxymethylglutaryl-CoA lyase MvaB SW:HMGL_PSEMV (P13703) (301 aa) fasta scores: E(): 7.2e-17, 36.03% id in 308 aa. (335 aa)
BP3848Putative enoyl-CoA hydratase/isomerase; Similar to Mus musculus AU-binding enoyl-CoA hydratase AUH TR:Q9JLZ3 (EMBL:AF118386) (314 aa) fasta scores: E(): 4.3e-15, 30.15% id in 262 aa, and to Mycobacterium tuberculosis hypothetical protein MTCY08D5.17 TR:P96404 (EMBL:Z92669) (262 aa) fasta scores: E(): 4.3e-23, 39.6% id in 250 aa. (259 aa)
BP3849Conserved hypothetical protein; Similar to Agrobacterium tumefaciens AGR_C_3858p TR:AAK87874 (EMBL:AE008129) (419 aa) fasta scores: E(): 8.2e-40, 34.09% id in 393 aa, and to Rhizobium meliloti putative conserved membrane-anchored protein SMB21182 TR:CAC49248 (EMBL:AL603645) (394 aa) fasta scores: E(): 1.5e-37, 33.58% id in 396 aa. Possible alternative translational start site; Belongs to the CoA-transferase III family. (420 aa)
Your Current Organism:
Bordetella pertussis
NCBI taxonomy Id: 257313
Other names: B. pertussis Tohama I, Bordetella pertussis Tohama I
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