STRINGSTRING
BP2059 BP2059 BP1784 BP1784 BP0668 BP0668 BP0636 BP0636 aceK aceK BP0422 BP0422 BP0332 BP0332 BP0026 BP0026 BP2759 BP2759 BP2099 BP2099 fabH fabH BP2557 BP2557 fabF fabF BP2100 BP2100
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BP2059Putative thiolase; Similar to many thioloases e.g. Alcaligenes eutrophus beta-ketothiolase bktB TR:O68275 (EMBL:AF026544) (394 aa) fasta scores: E(): 3.1e-106, 75.897% id in 390 aa and Clostridium acetobutylicum acetyl-CoA acetyltransferase thl or CAC2873 SW:THL_CLOAB (P45359) (392 aa) fasta scores: E(): 8.6e-70, 52.051% id in 390 aa; Belongs to the thiolase-like superfamily. Thiolase family. (395 aa)
BP1784Putative thiolase; Similar to Pseudomonas aeruginosa hypothetical protein Pa1016 TR:Q9I4V7 (EMBL:AE004534) (383 aa) fasta scores: E(): 7.5e-88, 60.31% id in 378 aa, and to Methanothermobacter thermautotrophicus lipid-transfer protein Mth793 TR:O26884 (EMBL:AE000857) (383 aa) fasta scores: E(): 8e-31, 32.03% id in 384 aa. (385 aa)
BP0668Probable thiolase; Similar to Cucurbita maxima 3-ketoacyl-CoA thiolase precursor TR:P93112 (EMBL:D70895) (461 aa) fasta scores: E(): 1.1e-50, 42.569% id in 397 aa, and to Deinococcus radiodurans acetyl-CoA acetyltransferase Dr1428 TR:Q9RUF8 (EMBL:AE001987) (402 aa) fasta scores: E(): 4.6e-94, 65.140% id in 393 aa; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
BP0636Conserved hypothetical protein; Similar to Rhodococcus spNCIMB 9784 non-specific lipid carrier-like protein CampC TR:AAK50624 (EMBL:AF323755) (408 aa) fasta scores: E(): 8.1e-37, 35.106% id in 376 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1016 TR:Q9I4V7 (EMBL:AE004534) (383 aa) fasta scores: E(): 2.1e-46, 41.425% id in 379 aa. (384 aa)
aceKIsocitrate dehydrogenase kinase/phosphatase (Pseudogene); In-frame TAG stop codon in pertussis; GAC in parapertussis and bronchiseptica; Belongs to the thiolase-like superfamily. Thiolase family. (389 aa)
BP0422Probable thiolase; Similar to Alcaligenes eutrophus acetyl-CoA acetyltransferase PhbA SW:THIL_ALCEU (P14611) (393 aa) fasta scores: E(): 1.5e-60, 46.530% id in 389 aa, and to Rhizobium meliloti probable thiolase Sma1450 TR:AAK65449 (EMBL:AE007266) (396 aa) fasta scores: E(): 7e-83, 60.870% id in 391 aa. Also similar to BP0447 (53.684% identity in 380 aa overlap); Belongs to the thiolase-like superfamily. Thiolase family. (397 aa)
BP0332Similar to Pseudomonas aeruginosa hypothetical protein Pa1016 TR:Q9I4V7 (EMBL:AE004534) (383 aa) fasta scores: E(): 3.6e-43, 40.874% id in 389 aa, and to Rhodococcus spNCIMB 9784 non-specific lipid carrier-like protein CampC TR:AAK50624 (EMBL:AF323755) (408 aa) fasta scores: E(): 7.9e-30, 31.807% id in 393 aa. Also highly similar to BP0933, 80.964% identity (81.378% ungapped) in 394 aa overlap. (398 aa)
BP0026Putative thiolase; Similar to Mycobacterium tuberculosis CDC1551 nonspecific lipid-transfer protein mt1663 TR:AAK45933 (EMBL:AE007030) (402 aa) fasta scores: E(): 5.1e-14, 27.229% id in 415 aa, and to Pseudomonas fluorescens PhlC TR:Q51727 (EMBL:U41818) (398 aa) fasta scores: E(): 5.2e-15, 27.188% id in 320 aa. (408 aa)
BP2759Putative thiolase; Similar to Acinetobacter calcoaceticus beta-ketoadipyl CoA thiolase PcaF SW:PCAF_ACICA (Q43974) (401 aa) fasta scores: E(): 7.9e-100, 68.67% id in 399 aa; Belongs to the thiolase-like superfamily. Thiolase family. (401 aa)
BP2099Similar to many putative thiolases e.g. Caulobacter crescentus thiolase family protein CC1432 TR:Q9A8C2 (EMBL:AE005818) (400 aa) fasta scores: E(): 1.5e-111, 67.929% id in 396 aa; Belongs to the thiolase-like superfamily. Thiolase family. (398 aa)
fabH3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. (328 aa)
BP2557Conserved hypothetical protein; Similar to many e.g. Pseudomonas aeruginosa hypothetical protein Pa1016 TR:Q9I4V7 (EMBL:AE004534) (383 aa) fasta scores: E(): 2.6e-46, 43.669% id in 387 aa. (387 aa)
fabF3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (409 aa)
BP2100Similar to Caulobacter crescentus hypothetical protein CC1431 TR:Q9A8C3 (EMBL:AE005818) (488 aa) fasta scores: E(): 3e-65, 44.136% id in 469 aa. (495 aa)
Your Current Organism:
Bordetella pertussis
NCBI taxonomy Id: 257313
Other names: B. pertussis Tohama I, Bordetella pertussis Tohama I
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