STRINGSTRING
ggt ggt BP2693 BP2693 BP3052 BP3052 BP3107 BP3107
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ggtSimilar to Escherichia coli gamma-glutamyltranspeptidase precursor Ggt or B3447 SW:GGT_ECOLI (P18956) (580 aa) fasta scores: E(): 1.6e-52, 35.484% id in 589 aa, and to Vibrio cholerae gamma-glutamyltranspeptidase Vc0194 TR:Q9KVF2 (EMBL:AE004109) (588 aa) fasta scores: E(): 5e-98, 49.206% id in 567 aa. (584 aa)
BP2693Similar to many putative gamma-glutamyltranspeptidases e.g. Mycobacterium tuberculosis putative gamma-glutamyltranspeptidase Rv0773c TR:P71828 (EMBL:Z80226) (512 aa) fasta scores: E(): 1.5e-90, 56.76% id in 525 aa. Also similar to Pseudomonas sp acylase acy 1 [includes: cephalosporin acylase SW:PAC1_PSES3 () (557 aa) fasta scores: E(): 1.1e-45, 31.81% id in 550 aa. (542 aa)
BP3052Putative gamma-glutamyltranspeptidase; Similar to Mycobacterium tuberculosis CDC1551 gamma-glutamyltransferase MT0797 TR:AAK45039 (EMBL:AE006970) (512 aa) fasta scores: E(): 4.2e-112, 56.73% id in 520 aa, and to Pseudomonas sp acylase AcyI SW:PAC1_PSES3 (P15557) (557 aa) fasta scores: E(): 5.3e-37, 33.03% id in 557 aa. (535 aa)
BP3107Similar to Streptomyces coelicolor putative gamma-glutamyltranspeptidase SC3C8.26 TR:O69935 (EMBL:AL023861) (603 aa) fasta scores: E(): 3.6e-36, 31.41% id in 573 aa, and to Escherichia coli gamma-glutamyltranspeptidase precursor Ggt or B3447 SW:GGT_ECOLI () (580 aa) fasta scores: E(): 1.5e-21, 31.52% id in 533 aa. (551 aa)
Your Current Organism:
Bordetella pertussis
NCBI taxonomy Id: 257313
Other names: B. pertussis Tohama I, Bordetella pertussis Tohama I
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