STRINGSTRING
RPA0420 RPA0420 RPA0421 RPA0421 RPA0458 RPA0458 RPA0459 RPA0459 RPA0464 RPA0464 RPA1003 RPA1003 RPA1234 RPA1234 fadD1 fadD1 RPA1449 RPA1449 RPA1732 RPA1732 fdxA fdxA RPA1763 RPA1763 RPA1766 RPA1766 RPA2142 RPA2142 RPA2146 RPA2146 acpP acpP RPA3336 RPA3336 RPA3338 RPA3338 mcyE mcyE RPA3340 RPA3340 RPA3465 RPA3465 RPA3656 RPA3656 fadD2 fadD2 pimA pimA RPA3778 RPA3778 RPA4267 RPA4267 RPA4421 RPA4421 RPA4823 RPA4823
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPA0420Conserved hypothetical protein; InterPro IPR001899. (206 aa)
RPA0421Possible cytochrome P450 hydroxylase superfamily proteins. (461 aa)
RPA0458Possible fatty acid-CoA ligases. (517 aa)
RPA0459Possible fatty acid-CoA ligases. (163 aa)
RPA0464Putative long-chain fatty-acid-CoA ligase. (541 aa)
RPA1003Putative acyl-CoA synthase. (544 aa)
RPA1234Possible long-chain-fatty-acid--CoA ligase. (566 aa)
fadD1Putative long-chain-fatty-acid CoA ligase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (503 aa)
RPA1449Putative long-chain fatty acid--CoA ligase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (571 aa)
RPA1732Possible cytochrome P450; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the cytochrome P450 family. (399 aa)
fdxAPutative ferredoxin; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (75 aa)
RPA1763Putative long-chain-fatty-acid CoA ligase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (525 aa)
RPA1766Putative long-chain-fatty-acid-CoA ligase. (514 aa)
RPA2142Putative fatty-acid--CoA ligase. (534 aa)
RPA2146Putative long-chain-fatty-acid--CoA ligase. (512 aa)
acpPConstitutive acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. (79 aa)
RPA3336Possible lipopeptide antibiotics iturin a biosynthesis protein; Belongs to the P-Pant transferase superfamily. (235 aa)
RPA3338Possible Condensation domain, peptide synthetase. (769 aa)
mcyEPossible McyE polykeitde synthase and peptide synthetase (AF183408). (2682 aa)
RPA3340Peptide synthetase (fragment). (637 aa)
RPA3465Putative long-chain-fatty-acid CoA ligase. (508 aa)
RPA3656Conserved hypothetical protein; COGs COG2070. (329 aa)
fadD2Putative long-chain fatty acid-CoA ligase. (520 aa)
pimApimeloyl-CoA ligase. (552 aa)
RPA3778Putative cytochrome p450-like enzyme. (406 aa)
RPA4267long-chain-fatty-acid-CoA-ligase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (563 aa)
RPA4421Putative 4-coumarate:CoA ligase 2; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (516 aa)
RPA4823Putative long-chain-fatty-acid-CoA ligase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (516 aa)
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
Server load: low (20%) [HD]