STRINGSTRING
RPA0145 RPA0145 RPA0283 RPA0283 RPA0286 RPA0286 RPA0317 RPA0317 RPA0370 RPA0370 RPA0390 RPA0390 RPA0494 RPA0494 RPA0521 RPA0521 RPA0522 RPA0522 RPA0529 RPA0529 RPA0561 RPA0561 regR regR regS regS RPA0583 RPA0583 RPA0635 RPA0635 RPA0754 RPA0754 RPA0767 RPA0767 RPA0777 RPA0777 RPA0778 RPA0778 RPA0783 RPA0783 RPA0885 RPA0885 RPA0886 RPA0886 RPA0914 RPA0914 RPA0981 RPA0981 phyB5 phyB5 RPA1121 RPA1121 RPA1180 RPA1180 RPA1181 RPA1181 RPA1248 RPA1248 RPA1249 RPA1249 RPA1296 RPA1296 RPA1313 RPA1313 RPA1314 RPA1314 RPA1315 RPA1315 RPA1327 RPA1327 RPA1328 RPA1328 vnfA vnfA anfA anfA RPA1556 RPA1556 RPA1557 RPA1557 RPA1558 RPA1558 RPA1642 RPA1642 RPA1657 RPA1657 RPA1680 RPA1680 RPA1681 RPA1681 RPA1682 RPA1682 RPA1716 RPA1716 RPA1767 RPA1767 RPA1790 RPA1790 RPA1818 RPA1818 RPA1858 RPA1858 RPA1930 RPA1930 RPA1932 RPA1932 glnE glnE RPA1938 RPA1938 RPA1972 RPA1972 RPA2074 RPA2074 RPA2075 RPA2075 RPA2107 RPA2107 RPA2108 RPA2108 RPA2109 RPA2109 RPA2135 RPA2135 RPA2152 RPA2152 RPA2292 RPA2292 RPA2367 RPA2367 RPA2368 RPA2368 RPA2369 RPA2369 RPA2369a RPA2369a RPA2370 RPA2370 RPA2432 RPA2432 RPA2433 RPA2433 RPA2434 RPA2434 RPA2476 RPA2476 RPA2769 RPA2769 RPA2957 RPA2957 RPA2984 RPA2984 RPA3014 RPA3014 phyB1 phyB1 phyB2 phyB2 rphyB rphyB RPA3018 RPA3018 RPA3022 RPA3022 RPA3076 RPA3076 RPA3132 RPA3132 RPA3133 RPA3133 RPA3170 RPA3170 RPA3184 RPA3184 RPA3187 RPA3187 RPA3216 RPA3216 RPA3410 RPA3410 RPA3569 RPA3569 RPA3570 RPA3570 RPA3571 RPA3571 RPA3616 RPA3616 RPA3792 RPA3792 RPA3832 RPA3832 cckA cckA RPA3933 RPA3933 RPA3934 RPA3934 RPA3994 RPA3994 RPA4009 RPA4009 RPA4010 RPA4010 RPA4112 RPA4112 RPA4140 RPA4140 RPA4167 RPA4167 RPA4172 RPA4172 RPA4173 RPA4173 fixL fixL fixJ fixJ RPA4282 RPA4282 RPA4367 RPA4367 RPA4368 RPA4368 RPA4369 RPA4369 RPA4417 RPA4417 vieA vieA RPA4523 RPA4523 RPA4524 RPA4524 RPA4565 RPA4565 nifA nifA RPA4738 RPA4738 RPA4753 RPA4753 phoB phoB phoR phoR RPA4789 RPA4789 RPA4790 RPA4790 RPA4791 RPA4791 RPA4830 RPA4830
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPA0145Metal dependent phosphohydrolase with a response regulator receiver domain; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (388 aa)
RPA0283Two-component transcriptional regulator, winged helix family; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (228 aa)
RPA0286Putative diguanylate cyclase (GGDEF) with HAMP domain. (557 aa)
RPA0317Sensor histidine kinase with a response regulator receiver domain. (636 aa)
RPA0370Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domains. (838 aa)
RPA0390Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domains. (745 aa)
RPA0494Sensor histidine kinase with PAS/PAC and Response regulator receiver domains. (1093 aa)
RPA0521Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL). (569 aa)
RPA0522Possible activator of photopigment and puc with BLUF domain. (147 aa)
RPA0529Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL); Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (580 aa)
RPA0561Hypothetical protein. (201 aa)
regRTwo-component transcriptional regulator RegR, Fis family; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (184 aa)
regSTwo component sensor histidine kinase, RegS. (440 aa)
RPA0583Sensor histidine kinase with PAS/PAC and Response regulator receiver domains; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (913 aa)
RPA0635Sensor histidine kinase. (492 aa)
RPA0754Putative signal transduction histidine kinase with PAS/PAC domains. (478 aa)
RPA0767Putative diguanylate cyclase (GGDEF) with PAS/PAC domain. (313 aa)
RPA0777Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domain. (904 aa)
RPA0778Conserved hypothetical protein. (133 aa)
RPA0783Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL). (605 aa)
RPA0885Conserved hypothetical protein. (90 aa)
RPA0886Putative diguanylate cyclase (GGDEF). (502 aa)
RPA0914Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domain; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (959 aa)
RPA0981Sensor histidine kinase with multiple PAS and a response regulator receiver domain. (795 aa)
phyB5Bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB5. (845 aa)
RPA1121Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL). (776 aa)
RPA1180Putative cylclic diguanylate phosphodiesterase (EAL). (521 aa)
RPA1181Haloacid dehalogenase-like hydrolase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (284 aa)
RPA1248Two-component transcriptional regulator, LuxR family. (308 aa)
RPA1249Sensor histidine kinase with a response regulator receiver domain. (1122 aa)
RPA1296Putative diguanylate cyclase (GGDEF) with HAMP domain. (587 aa)
RPA1313Sensor histidine kinase with multiple PAS/PAC domains. (632 aa)
RPA1314Response regulator receiver (CheY-like protein). (143 aa)
RPA1315Two-component transcriptional regulator, LuxR family. (228 aa)
RPA1327Ser/Thr protein kinase. (318 aa)
RPA1328Sensor histidine kinase with a GAF and an unknown domain. (1380 aa)
vnfASigma-54 dependent, Vanadium nitrogenase transcriptional regulator, VnfA. (544 aa)
anfASigma-54 dependent, Iron nitrogenase transcriptional regulator, AnfA. (542 aa)
RPA1556Phosphotransfer protein with response regulator receiver and Hpt domains. (229 aa)
RPA1557Response regulator receiver with duplicated domains. (278 aa)
RPA1558Sensor histidine kinase with multiple PAS/PAC and a response regulator receiver domain. (903 aa)
RPA1642Putative diguanylate cyclase (GGDEF). (504 aa)
RPA1657Putative diguanylate cyclase (GGDEF). (404 aa)
RPA1680Putative response regulator and cylclic diguanylate phosphodiesterase (EAL). (416 aa)
RPA1681Sensor histidine kinase with a response regulator receiver domain. (863 aa)
RPA1682Ptwo-component transcriptional regulator, LuxR family; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (208 aa)
RPA1716Putative diguanylate cyclase (GGDEF). (736 aa)
RPA1767Sensor histidine kinase with a PAC motif and a response regulator receiver domain. (769 aa)
RPA1790Putative diguanylate cyclase (GGDEF). (272 aa)
RPA1818Putative diguanylate cyclase (GGDEF). (429 aa)
RPA1858Sensor histidine kinase with a PAS domain. (610 aa)
RPA1930Two-component transcriptional regulator, winged helix family. (241 aa)
RPA1932Sensor histidine kinase. (482 aa)
glnEPutative glutamate-ammonia-ligase adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the sign [...] (990 aa)
RPA1938Sensor histidine kinase, possible pleC. (779 aa)
RPA1972Sensor histidine kinase. (532 aa)
RPA2074Response regulator receiver (CheY-like protein). (122 aa)
RPA2075Putative signal transduction histidine kinase with GAF and PAS/PAC domains. (633 aa)
RPA2107Sensor histidine kinase with a GAF, a Ser/Thr protein kinase, and an unknown domain. (1712 aa)
RPA2108Response regulator receiver (CheY-like protein). (128 aa)
RPA2109Two-component transcriptional regulator, LuxR family. (211 aa)
RPA2135Sensor histidine kinase with a response regulator receiver domain. (707 aa)
RPA2152Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domain. (709 aa)
RPA2292Sensor histidine kinase. (474 aa)
RPA2367Two component sensor histidine kinase, possible AdeS. (367 aa)
RPA2368Pseudogene-two-component transcriptional regulator, winged helix family. (77 aa)
RPA2369Pseudogene-two-component transcriptional regulator, winged helix family. (137 aa)
RPA2369aHypothetical protein. (85 aa)
RPA2370Hypothetical protein. (46 aa)
RPA2432Putative signal transduction histidine kinase with response regulator receiver domain; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (363 aa)
RPA2433Response regulator receiver (CheY-like protein); Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (147 aa)
RPA2434Sensor histidine kinase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (510 aa)
RPA2476Putative diguanylate cyclase (GGDEF). (355 aa)
RPA2769Putative diguanylate cyclase (GGDEF). (411 aa)
RPA2957Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL). (882 aa)
RPA2984Putative diguanylate cyclase (GGDEF). (383 aa)
RPA3014Two-component transcriptional regulator, LuxR family; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (235 aa)
phyB1Bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB1. (758 aa)
phyB2Bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB2. (775 aa)
rphyBResponse regulator receiver (CheY-like protein). (154 aa)
RPA3018Response regulator receiver:histidine kinase. (378 aa)
RPA3022Putative diguanylate cyclase (GGDEF). (388 aa)
RPA3076Putative diguanylate cyclase (GGDEF). (449 aa)
RPA3132Putative diguanylate cyclase (GGDEF) with response regulator receiver domain. (457 aa)
RPA3133Response regulator receiver (CheY-like protein). (121 aa)
RPA3170Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS and GAF domains. (873 aa)
RPA3184Putative cylclic diguanylate phosphodiesterase (EAL). (449 aa)
RPA3187Sensor histidine kinase with a PAS/PAC domain. (917 aa)
RPA3216Sensor histidine kinase with multiple PAS and a response regulator receiver domain. (686 aa)
RPA3410Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domains. (824 aa)
RPA3569Hypothetical protein. (180 aa)
RPA3570Two-component transcriptional regulator, winged helix family. (240 aa)
RPA3571Two component sensor histidine kinase. (444 aa)
RPA3616Putative diguanylate cyclase (GGDEF) with PAS/PAC domain. (644 aa)
RPA3792Putative diguanylate cyclase (GGDEF). (379 aa)
RPA3832Putative diguanylate cyclase (GGDEF) with PAS/PAC domain. (356 aa)
cckASensor histidine kinase with multiple PAS and a response regulator receiver domain; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (882 aa)
RPA3933Sensor histidine kinase with multiple PAS and a response regulator receiver domain; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (1021 aa)
RPA3934Sensor histidine kinase with a PAC motif and a response regulator receiver domain. (402 aa)
RPA3994Putative diguanylate cyclase (GGDEF). (382 aa)
RPA4009Putative signal transduction histidine kinase with GAF domain. (682 aa)
RPA4010Response regulator receiver (CheY-like protein). (125 aa)
RPA4112Putative diguanylate cyclase (GGDEF). (297 aa)
RPA4140Sensor histidine kinase with a PAS domain. (348 aa)
RPA4167Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domains. (912 aa)
RPA4172Hypothetical protein. (119 aa)
RPA4173Putative diguanylate cyclase (GGDEF); Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (250 aa)
fixLTwo component low oxygen sensor histidine kinase with PAS domains, fixL; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (508 aa)
fixJTwo-component nitrogen fixation transcriptional regulator fixJ, LuxR family; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (203 aa)
RPA4282Possible activator of photopigment and puc with BLUF domain. (157 aa)
RPA4367Sensor histidine kinase. (462 aa)
RPA4368Two-component transcriptional regulator, winged helix family; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (240 aa)
RPA4369Transcriptional regulator, MarR family. (183 aa)
RPA4417Sensor histidine kinase with PAS/PAC and response regulator receiver domains. (873 aa)
vieAPutative cylclic diguanylate phosphodiesterase (EAL). (404 aa)
RPA4523Response regulator receiver (CheY-like protein). (129 aa)
RPA4524Sensor histidine kinase. (518 aa)
RPA4565Putative diguanylate cyclase (GGDEF). (400 aa)
nifAMo/Fe nitrogenase specific transcriptional regulator, NifA; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (584 aa)
RPA4738Response regulator receiver (CheY-like protein); Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (126 aa)
RPA4753Histidine kinase with a response regulator receiver domain. (405 aa)
phoBTwo-component phosphate transcriptional regulator PhoB. (237 aa)
phoRTwo component sensor histidine kinase phoR. (449 aa)
RPA4789Sensor histidine kinase. (703 aa)
RPA4790Response regulator receiver:histidine kinase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (550 aa)
RPA4791Two-component transcriptional regulator, winged helix family; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (246 aa)
RPA4830Metal dependent phosphohydrolase with a response regulator receiver domain. (370 aa)
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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