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RPA1370 RPA1370 vnfX vnfX vnfN vnfN vnfE vnfE RPA1382 RPA1382 RPA1927 RPA1927 RPA1928 RPA1928 RPA3088 RPA3088 nifW nifW nifV nifV nifS2 nifS2 nifU nifU RPA4610 RPA4610 nifQ nifQ fdxB fdxB RPA4613 RPA4613 RPA4614 RPA4614 nifX nifX nifN nifN nifE nifE nifK nifK nifD nifD nifH4 nifH4 RPA4621 RPA4621 RPA4622 RPA4622 fixU, fixU, RPA4624 RPA4624 nifZ nifZ RPA4626 RPA4626 RPA4627 RPA4627 hesB hesB ferN ferN nifB nifB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPA1370Nitrogen-fixing NifU, C-terminal. (355 aa)
vnfXPutative vanadium nitrogenase protein. (161 aa)
vnfNPutative nitrogenase cofactor synthesis protein. (460 aa)
vnfEPutative nitrogenase cofactor synthesis protein; Belongs to the NifD/NifK/NifE/NifN family. (460 aa)
RPA1382Nitrogen fixation-related protein. (161 aa)
RPA1927Hypothetical protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (194 aa)
RPA1928Ferredoxin-like protein [2Fe-2S]; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (302 aa)
RPA3088Conserved hypothetical protein; COGs COG0327. (130 aa)
nifWNitrogenase stabilizer NifW; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family. (116 aa)
nifVPutative homocitrate synthase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the alpha-IPM synthase/homocitrate synthase family. (397 aa)
nifS2Nitrogenase cofactor synthesis protein nifS; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. (410 aa)
nifUPutative nifU protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. (328 aa)
RPA4610Protein of unknown function, HesB/YadR/YfhF; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the HesB/IscA family. (106 aa)
nifQPutative nitrogen fixation protein nifQ. (236 aa)
fdxBFerredoxin 2[4Fe-4S] III, fdxB; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (103 aa)
RPA4613DUF683; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (68 aa)
RPA4614DUF269; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (154 aa)
nifXNitrogenase molybdenum-iron protein nifX; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (132 aa)
nifNNitrogenase reductase-associated ferredoxin, nifN; Belongs to the NifD/NifK/NifE/NifN family. (457 aa)
nifENitrogenase molybdenum-cofactor synthesis protein nifE; Belongs to the NifD/NifK/NifE/NifN family. (487 aa)
nifKNitrogenase molybdenum-iron protein beta chain, nifK; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family. (519 aa)
nifDNitrogenase molybdenum-iron protein alpha chain, nifD; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (487 aa)
nifH4Nitrogenase iron protein, nifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family. (298 aa)
RPA4621Conserved hypothetical protein. (300 aa)
RPA4622Hypothetical protein. (92 aa)
fixU,Conserved hypothetical protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (66 aa)
RPA4624Hypothetical protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (77 aa)
nifZNifZ domain. (99 aa)
RPA4626Protein of unknown function from Deinococcus and Synechococcus; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (261 aa)
RPA4627Conserved hypothetical protein; InterPro IPR001440 COGs COG0457. (179 aa)
hesBProtein of unknown function, HesB/YadR/YfhF; Belongs to the HesB/IscA family. (118 aa)
ferNFerredoxin 2[4Fe-4S], fdxN. (73 aa)
nifBNitrogen fixation protein nifB; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (518 aa)
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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