STRINGSTRING
nifQ nifQ fdxB fdxB nifX nifX nifN nifN nifE nifE nifB nifB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nifQPutative nitrogen fixation protein nifQ. (236 aa)
fdxBFerredoxin 2[4Fe-4S] III, fdxB; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (103 aa)
nifXNitrogenase molybdenum-iron protein nifX; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (132 aa)
nifNNitrogenase reductase-associated ferredoxin, nifN; Belongs to the NifD/NifK/NifE/NifN family. (457 aa)
nifENitrogenase molybdenum-cofactor synthesis protein nifE; Belongs to the NifD/NifK/NifE/NifN family. (487 aa)
nifBNitrogen fixation protein nifB; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (518 aa)
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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