STRINGSTRING
RPA0419 RPA0419 RPA0421 RPA0421 RPA0785 RPA0785 RPA1777 RPA1777 RPA2038 RPA2038 RPA2748 RPA2748 RPA3193 RPA3193 RPA3461 RPA3461 RPA3467 RPA3467
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPA0419Possible short chain dehydrogenase/reductase family member; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (259 aa)
RPA0421Possible cytochrome P450 hydroxylase superfamily proteins. (461 aa)
RPA0785Possible cytochrome P450 family proteins; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (459 aa)
RPA1777DUF35; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (137 aa)
RPA2038Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (284 aa)
RPA2748Possible short-chain dehydrogenase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (322 aa)
RPA3193DUF35; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (130 aa)
RPA3461Conserved hypothetical protein. (121 aa)
RPA3467Probable UDP-glucose 4-epimerase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (354 aa)
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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