STRINGSTRING
phoU phoU kaiB kaiB phyB3 phyB3 grpE grpE argG argG RPA0420 RPA0420 hspD hspD RPA0921 RPA0921 RPA0947 RPA0947 csgB, csgB, RPA1085 RPA1085 phyB4 phyB4 hemF hemF RPA1626 RPA1626 RPA1818 RPA1818 RPA2868 RPA2868 phyB1 phyB1 phyB2 phyB2 RPA3132 RPA3132 RPA3332 RPA3332 fliL fliL RPA4357 RPA4357 RPA4389 RPA4389 argD2 argD2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
phoUPhosphate regulon transcriptional regulator, phoU; Plays a role in the regulation of phosphate uptake. (238 aa)
kaiBCircadian clock protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (94 aa)
phyB3Bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB3; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (759 aa)
grpEPossible heat shock protein (HSP-70 COFACTOR), grpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction c [...] (208 aa)
argGArgininosuccinate synthase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the argininosuccinate synthase family. Type 2 subfamily. (445 aa)
RPA0420Conserved hypothetical protein; InterPro IPR001899. (206 aa)
hspDSmall heat shock protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the small heat shock protein (HSP20) family. (158 aa)
RPA0921Possible flagellar motor protein MotB. (341 aa)
RPA0947Conserved hypothetical protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division. (136 aa)
csgB,Possible minor curlin subunit precursor (fimbrin sef17 minor subunit). (163 aa)
RPA1085Hypothetical protein. (138 aa)
phyB4Bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB4. (770 aa)
hemFPutative coproporphyrinogen III oxidase precursor; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (303 aa)
RPA1626Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (218 aa)
RPA1818Putative diguanylate cyclase (GGDEF). (429 aa)
RPA2868Septum formation initiator. (105 aa)
phyB1Bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB1. (758 aa)
phyB2Bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB2. (775 aa)
RPA3132Putative diguanylate cyclase (GGDEF) with response regulator receiver domain. (457 aa)
RPA3332Hypothetical protein. (94 aa)
fliLFlagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (166 aa)
RPA4357Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (92 aa)
RPA4389Small Conductance Mechanosensitive (MscS) Ion Channel; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (620 aa)
argD2Putative acetylornithine aminotransferase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (420 aa)
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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