STRINGSTRING
pucAe pucAe RPA1246 RPA1246 pucBe pucBe RPA1500 RPA1500 pufB pufB pufA pufA pufL pufL pufM pufM puhA puhA pucAa pucAa pucBa pucBa pucBc pucBc pucAd pucAd pucBd pucBd pucBb pucBb pucAb pucAb
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pucAeLight-harvesting protein B-800-850 alpha chain E; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (59 aa)
RPA1246Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (233 aa)
pucBeLight-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (51 aa)
RPA1500Unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (199 aa)
pufBLight-harvesting complex 1 beta chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (65 aa)
pufALight-harvesting complex 1 alpha chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (63 aa)
pufLPhotosynthetic reaction center L subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. (277 aa)
pufMPhotosynthetic reaction center M protein; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. (307 aa)
puhAH subunit of photosynthetic reaction center complex; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (255 aa)
pucAaLight-harvesting protein B-800-850 alpha chain A; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (59 aa)
pucBaLight-harvesting protein B-800-850 beta chain A; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (47 aa)
pucBcLight-harvesting protein B-800-850 beta chain C; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (51 aa)
pucAdLight-harvesting protein B-800-850 alpha chain D; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (59 aa)
pucBdLight-harvesting protein B-800-850 beta chain D; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (51 aa)
pucBbLight harvesting protein B-800-850, beta chain B (antenna pigment protein, beta chain B). (51 aa)
pucAbLight-harvesting protein B-800-850 alpha chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (66 aa)
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
Server load: low (28%) [HD]