STRINGSTRING
anfD anfD vnfX vnfX vnfN vnfN vnfE vnfE vnfD vnfD vnfK vnfK RPA1382 RPA1382 anfK anfK bchB bchB RPA2347 RPA2347 RPA2348 RPA2348 NifD1 NifD1 RPA2364 RPA2364 RPA2616 RPA2616 RPA2617 RPA2617 NifD2 NifD2 RPA2637 RPA2637 nifX nifX nifN nifN nifE nifE nifK nifK nifD nifD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
anfDPutative nitrogenase molybdenum-iron protein alpha chain (nitrogenase component I) (dinitrogenase). (522 aa)
vnfXPutative vanadium nitrogenase protein. (161 aa)
vnfNPutative nitrogenase cofactor synthesis protein. (460 aa)
vnfEPutative nitrogenase cofactor synthesis protein; Belongs to the NifD/NifK/NifE/NifN family. (460 aa)
vnfDNitrogenase vanadium-iron protein alpha chain. (472 aa)
vnfKNitrogenase vanadium-iron protein, VnfK subunit; Belongs to the NifD/NifK/NifE/NifN family. (462 aa)
RPA1382Nitrogen fixation-related protein. (161 aa)
anfKAlternative nitrogenase 3 beta chain; Belongs to the NifD/NifK/NifE/NifN family. (461 aa)
bchBProtochlorophyllide reductase BchB subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. (540 aa)
RPA2347Possible vanadium nitrogenase associated protein N (U51863). (463 aa)
RPA2348Possible nitrogenase molybdenum-iron protein alpha chain (nitrogenase component I) (dinitrogenase). (511 aa)
NifD1Possible nitrogenase molybdenum-iron protein alpha chain (nitrogenase component I) (dinitrogenase). (501 aa)
RPA2364Possible nitrogenase iron-molybdenum cofactor biosynthesis protein NifE homolog. (459 aa)
RPA2616Possible nitrogenase iron-molybdenum cofactor biosynthesis protein NifE homolog. (452 aa)
RPA2617Possible vanadium nitrogenase associated protein vnfN (U51863). (416 aa)
NifD2Possible nitrogenase molybdenum-iron protein alpha chain (nitrogenase component I) (dinitrogenase). (502 aa)
RPA2637Possible nitrogenase iron-molybdenum protein subunit nifK homolog. (460 aa)
nifXNitrogenase molybdenum-iron protein nifX; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (132 aa)
nifNNitrogenase reductase-associated ferredoxin, nifN; Belongs to the NifD/NifK/NifE/NifN family. (457 aa)
nifENitrogenase molybdenum-cofactor synthesis protein nifE; Belongs to the NifD/NifK/NifE/NifN family. (487 aa)
nifKNitrogenase molybdenum-iron protein beta chain, nifK; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family. (519 aa)
nifDNitrogenase molybdenum-iron protein alpha chain, nifD; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (487 aa)
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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