STRINGSTRING
RPA3216 RPA3216 RPA0561 RPA0561 RPA0007 RPA0007 RPA0494 RPA0494 RPA1767 RPA1767 RPA0981 RPA0981 RPA3933 RPA3933 cckA cckA RPA3832 RPA3832 RPA4417 RPA4417 RPA4167 RPA4167 RPA3187 RPA3187 RPA3410 RPA3410
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPA3216Sensor histidine kinase with multiple PAS and a response regulator receiver domain. (686 aa)
RPA0561Hypothetical protein. (201 aa)
RPA0007Putative signal transduction histidine kinase with PAS/PAC domains. (483 aa)
RPA0494Sensor histidine kinase with PAS/PAC and Response regulator receiver domains. (1093 aa)
RPA1767Sensor histidine kinase with a PAC motif and a response regulator receiver domain. (769 aa)
RPA0981Sensor histidine kinase with multiple PAS and a response regulator receiver domain. (795 aa)
RPA3933Sensor histidine kinase with multiple PAS and a response regulator receiver domain; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (1021 aa)
cckASensor histidine kinase with multiple PAS and a response regulator receiver domain; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (882 aa)
RPA3832Putative diguanylate cyclase (GGDEF) with PAS/PAC domain. (356 aa)
RPA4417Sensor histidine kinase with PAS/PAC and response regulator receiver domains. (873 aa)
RPA4167Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domains. (912 aa)
RPA3187Sensor histidine kinase with a PAS/PAC domain. (917 aa)
RPA3410Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domains. (824 aa)
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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