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cbbT2 cbbT2 cbbT1 cbbT1 cbbP cbbP cbbF cbbF malQ malQ RPA3297 RPA3297 pyk pyk pucBb pucBb pucAb pucAb RPA4404 RPA4404 cbbA cbbA acsA acsA dnaK dnaK cbbJ, cbbJ, cbbG cbbG RPA2271 RPA2271 aapJ-1 aapJ-1 pufB pufB pucC pucC pucAe pucAe pucBe pucBe rpoD rpoD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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cbbT2Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. (661 aa)
cbbT1Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. (655 aa)
cbbPPhosphoribulokinase (phosphopentokinase) (PRK); Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (291 aa)
cbbFFructose-1,6-bisphosphatase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (343 aa)
malQPutative 4-alpha-glucanotransferase. (650 aa)
RPA3297Possible branched-chain amino acid transport system substrate-binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (450 aa)
pykPyruvate kinase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the pyruvate kinase family. (477 aa)
pucBbLight harvesting protein B-800-850, beta chain B (antenna pigment protein, beta chain B). (51 aa)
pucAbLight-harvesting protein B-800-850 alpha chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (66 aa)
RPA4404Putative periplasmic binding ABC transporter protein, probable sugar binding; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (596 aa)
cbbAFructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. (361 aa)
acsAacetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (650 aa)
dnaKHeat shock protein DnaK (70); Acts as a chaperone; Belongs to the heat shock protein 70 family. (631 aa)
cbbJ,Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (278 aa)
cbbGGlyceraldehyde-3-phosphate dehydrogenase(GAPDH); Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (335 aa)
RPA2271Putative Pyruvate kinase; Belongs to the pyruvate kinase family. (394 aa)
aapJ-1ABC transporter, periplasmic amino acid binding protein aapJ-1; Observed by proteomics; Citation: Walshaw and Poole (1996) Mol. Microbiol. 21:1239-52; Belongs to the bacterial solute-binding protein 3 family. (338 aa)
pufBLight-harvesting complex 1 beta chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (65 aa)
pucCPucC, possible chlorophyll Major Facilitator Superfamily (MFS) exporter. (478 aa)
pucAeLight-harvesting protein B-800-850 alpha chain E; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (59 aa)
pucBeLight-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (51 aa)
rpoDRNA polymerase sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (698 aa)
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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