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nifN nifN vnfH vnfH anfH anfH nifH1 nifH1 nifH3 nifH3 glnB glnB fixX fixX nifW nifW nifV nifV nifU nifU nifQ nifQ RPA4614 RPA4614 nifX nifX nifE nifE nifK nifK nifD nifD nifH4 nifH4 nifZ nifZ nifB nifB nifA nifA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nifNNitrogenase reductase-associated ferredoxin, nifN; Belongs to the NifD/NifK/NifE/NifN family. (457 aa)
vnfHNitrogenase iron protein, vnfH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family. (296 aa)
anfHNitrogenase iron protein (nitrogenase component II) (nitrogenase reductase); The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family. (275 aa)
nifH1Putative nitrogenase NifH subunit; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family. (291 aa)
nifH3Putative nitrogenase reductase NifH subunit; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family. (289 aa)
glnBNitrogen regulatory protein P-II; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the P(II) protein family. (112 aa)
fixXFerredoxin like protein, fixX; Could be a 3Fe-4S cluster-containing protein. (98 aa)
nifWNitrogenase stabilizer NifW; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family. (116 aa)
nifVPutative homocitrate synthase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the alpha-IPM synthase/homocitrate synthase family. (397 aa)
nifUPutative nifU protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. (328 aa)
nifQPutative nitrogen fixation protein nifQ. (236 aa)
RPA4614DUF269; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (154 aa)
nifXNitrogenase molybdenum-iron protein nifX; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (132 aa)
nifENitrogenase molybdenum-cofactor synthesis protein nifE; Belongs to the NifD/NifK/NifE/NifN family. (487 aa)
nifKNitrogenase molybdenum-iron protein beta chain, nifK; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family. (519 aa)
nifDNitrogenase molybdenum-iron protein alpha chain, nifD; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (487 aa)
nifH4Nitrogenase iron protein, nifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family. (298 aa)
nifZNifZ domain. (99 aa)
nifBNitrogen fixation protein nifB; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (518 aa)
nifAMo/Fe nitrogenase specific transcriptional regulator, NifA; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (584 aa)
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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