STRINGSTRING
Psyc_0025 Psyc_0025 Psyc_0079 Psyc_0079 hemD hemD Psyc_0119 Psyc_0119 Psyc_0136 Psyc_0136 Psyc_0138 Psyc_0138 Psyc_0159 Psyc_0159 Psyc_0174 Psyc_0174 Psyc_0175 Psyc_0175 Psyc_0226 Psyc_0226 Psyc_0227 Psyc_0227 Psyc_0251 Psyc_0251 Psyc_0262 Psyc_0262 Psyc_0263 Psyc_0263 zipA zipA Psyc_0337 Psyc_0337 Psyc_0341 Psyc_0341 Psyc_0437 Psyc_0437 Psyc_0438 Psyc_0438 Psyc_0539 Psyc_0539 Psyc_0544 Psyc_0544 Psyc_0558 Psyc_0558 Psyc_0560 Psyc_0560 Psyc_0672 Psyc_0672 pilF pilF Psyc_0681 Psyc_0681 Psyc_0684 Psyc_0684 Psyc_0698 Psyc_0698 yjeG yjeG Psyc_0714 Psyc_0714 Psyc_0732 Psyc_0732 Psyc_0773 Psyc_0773 Psyc_0785 Psyc_0785 Psyc_0788 Psyc_0788 Psyc_0800 Psyc_0800 Psyc_0811 Psyc_0811 Psyc_0827 Psyc_0827 Psyc_0891 Psyc_0891 Psyc_0906 Psyc_0906 Psyc_0930 Psyc_0930 Psyc_0946 Psyc_0946 Psyc_0947 Psyc_0947 Psyc_0970 Psyc_0970 Psyc_1081 Psyc_1081 Psyc_1090 Psyc_1090 Psyc_1119 Psyc_1119 Psyc_1120 Psyc_1120 recD recD recB recB recC recC Psyc_1166 Psyc_1166 Psyc_1192 Psyc_1192 Psyc_1231 Psyc_1231 Psyc_1262 Psyc_1262 cvpA cvpA Psyc_1285 Psyc_1285 Psyc_1307 Psyc_1307 Psyc_1329 Psyc_1329 Psyc_1330 Psyc_1330 Psyc_1331 Psyc_1331 Psyc_1401 Psyc_1401 Psyc_1405 Psyc_1405 Psyc_1406 Psyc_1406 Psyc_1417 Psyc_1417 Psyc_1469 Psyc_1469 Psyc_1506 Psyc_1506 Psyc_1509 Psyc_1509 Psyc_1510 Psyc_1510 Psyc_1514 Psyc_1514 Psyc_1550 Psyc_1550 Psyc_1611 Psyc_1611 Psyc_1628 Psyc_1628 ompN ompN Psyc_1718 Psyc_1718 Psyc_1734 Psyc_1734 Psyc_1756 Psyc_1756 Psyc_1764 Psyc_1764 Psyc_1776 Psyc_1776 Psyc_1807 Psyc_1807 Psyc_1832 Psyc_1832 Psyc_1839 Psyc_1839 Psyc_1854 Psyc_1854 Psyc_1860 Psyc_1860 Psyc_1872 Psyc_1872 Psyc_1915 Psyc_1915 Psyc_1945 Psyc_1945 Psyc_1947 Psyc_1947 Psyc_1978 Psyc_1978 Psyc_2091 Psyc_2091 Psyc_2111 Psyc_2111
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Psyc_0025Conserved hypothetical protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. (361 aa)
Psyc_0079Conserved hypothetical protein. (370 aa)
hemDPossible uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. (327 aa)
Psyc_0119Conserved hypothetical protein. (170 aa)
Psyc_0136Conserved hypothetical protein. (124 aa)
Psyc_0138Conserved hypothetical protein. (375 aa)
Psyc_0159Hypothetical protein. (255 aa)
Psyc_0174Hypothetical protein; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. (212 aa)
Psyc_0175Hypothetical protein. (554 aa)
Psyc_0226Probable endonuclease. (498 aa)
Psyc_0227Conserved hypothetical protein. (514 aa)
Psyc_0251Conserved hypothetical protein; PRC barrel domain present. (284 aa)
Psyc_0262Hypothetical protein; Possible Na+ dependent transporter of the SNF family. Signal peptide and 11 transmembrane helices predicted. (380 aa)
Psyc_0263Conserved hypothetical protein; Belongs to the UPF0125 (RnfH) family. (134 aa)
zipAPossible cell division protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family. (341 aa)
Psyc_0337Hypothetical protein. (195 aa)
Psyc_0341Conserved hypothetical protein. (150 aa)
Psyc_0437Hypothetical protein. (176 aa)
Psyc_0438Conserved hypothetical protein; Part of a putative prophage. (320 aa)
Psyc_0539Putative transposase OrfA, IS3/IS911family; Transposase. (91 aa)
Psyc_0544Hypothetical protein; 4 transmembrane domains predicted. (207 aa)
Psyc_0558Hypothetical protein. (184 aa)
Psyc_0560Conserved hypothetical protein; Possible transcriptional activator. (177 aa)
Psyc_0672Citation: possible Binding-protein-dependent transport systems inner membrane component domain though these are usually located at c-term; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.941 at residue 32. (492 aa)
pilFPossible type 4 fimbrial biogenesis protein; TPR repeat implicated to be involved in protein-protein interaction. (315 aa)
Psyc_0681Hypothetical protein. (273 aa)
Psyc_0684Hypothetical protein. (264 aa)
Psyc_0698Conserved hypothetical protein; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.791 at residue 23. (299 aa)
yjeGProbable FxsA cytoplasmic membrane protein. (205 aa)
Psyc_0714Hypothetical protein. (236 aa)
Psyc_0732Hypothetical protein. (171 aa)
Psyc_0773Hypothetical protein. (193 aa)
Psyc_0785Possible competence protein, ComEC; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.990) with cleavage site probability 0.913 at residue 21. (986 aa)
Psyc_0788Hypothetical protein; 7 transmembrane helices. (265 aa)
Psyc_0800Conserved hypothetical protein. (107 aa)
Psyc_0811Possible glycosyl transferase. (409 aa)
Psyc_0827Conserved hypothetical protein; RBS found. (118 aa)
Psyc_0891Transcriptional regulator, TetR family. (227 aa)
Psyc_0906Hypothetical protein; Contains an ATP binding domain; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.998 at residue 22. (274 aa)
Psyc_0930Hypothetical protein; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.991) with cleavage site probability 0.990 at residue 31. (309 aa)
Psyc_0946Hypothetical protein. (100 aa)
Psyc_0947Conserved hypothetical protein; Protein of unknown function DUF218 domain. (265 aa)
Psyc_0970Possible small-conductance mechanosensitive ion channel; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.989 at residue 50. (650 aa)
Psyc_1081Conserved hypothetical protein; 65bp signalP site at n-terminus; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.999) with cleavage site probability 0.998 at residue 65. (404 aa)
Psyc_1090Hypothetical protein; Weak rbs. 37 bp cleavage site predicted. Predicted by generation, glimmer and critica. (224 aa)
Psyc_1119Conserved hypothetical protein; Probable integral membrane proteindue to presence of 4 transmembrane domains. (469 aa)
Psyc_1120Conserved hypothetical protein; ATP/GTP binding motif. (524 aa)
recDProbable exonuclease V, alpha subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and r [...] (734 aa)
recBDNA helicase/exodeoxyribonuclease V, beta subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombi [...] (1495 aa)
recCPossible exoribodeoxynuclease V, gamma subunit. (1512 aa)
Psyc_1166Hypothetical protein; RBS found. (343 aa)
Psyc_1192Hypothetical protein; RBS found. One predicted transmembrane helix. Contains a predicted signal peptidase target sequence. (392 aa)
Psyc_1231Major facilitator superfamily (MFS) transporter; 12 transmembrane domains. (428 aa)
Psyc_1262Conserved hypothetical protein; Belongs to the UPF0250 family. (130 aa)
cvpAPossible colicin V production protein. (165 aa)
Psyc_1285Possible phospho-histidine phosphatase. (152 aa)
Psyc_1307Hypothetical protein. (206 aa)
Psyc_1329Transcriptional regulator, TetR family; Not enough evidence to determine sub family membership. (246 aa)
Psyc_1330Possible endonuclease/exonuclease/phosphatase family protein. (341 aa)
Psyc_1331Conserved hypothetical protein; RBS found. (225 aa)
Psyc_1401Possible permease transmembrane protein. (240 aa)
Psyc_1405Conserved hypothetical protein; LysM domain is about 40 residues long and is found in a variety of enzymes involved in bacterial cell wall degradation; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.994) with cleavage site probability 0.849 at residue 36. (604 aa)
Psyc_1406Conserved hypothetical protein; Contains TPR repeat know to be involved in protein-protein interaction. (531 aa)
Psyc_1417Putative outer membrane protein, FadL family. (386 aa)
Psyc_1469Conserved Hypothetical protein; Protein interacting Tpr repeat domain; Citation: ieter P., Tugendreich S., Lamb J.R. Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem. Sci. 20: 257- 259 (1995) [PubMed: 7667876 ]; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.989) with cleavage site probability 0.571 at residue 44. (291 aa)
Psyc_1506Hypothetical protein. (245 aa)
Psyc_1509Hypothetical protein; RBS found. (1664 aa)
Psyc_1510Conserved Hypothetical protein. (1045 aa)
Psyc_1514Conserved hypothetical protein; Serine dependent catalytic site present; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 0.998) with cleavage site probability 0.343 at residue 40. (868 aa)
Psyc_1550Hypothetical protein; RBS found. Contains a Sel1-like repeat. (431 aa)
Psyc_1611Possible DNA helicase: AAA ATPase. (653 aa)
Psyc_1628Adenylate cyclase. (518 aa)
ompNPossible porin, gram-negative type. (365 aa)
Psyc_1718Conserved hypothetical protein. (466 aa)
Psyc_1734Conserved hypothetical protein. (182 aa)
Psyc_1756Conserved hypothetical protein. (720 aa)
Psyc_1764Hypothetical protein. (208 aa)
Psyc_1776Conserved hypothetical protein; 2 TM domains. (150 aa)
Psyc_1807Hypothetical protein; 3 transmembrane helices. (371 aa)
Psyc_1832Conserved hypothetical protein; DUF81, 7 transmembrane helices. (257 aa)
Psyc_1839Hypothetical protein; 1 transmembrane helix. (454 aa)
Psyc_1854Conserved hypothetical protein; Belongs to the UPF0149 family. (185 aa)
Psyc_1860Hypothetical protein. (168 aa)
Psyc_1872Conserved hypothetical protein; 5 transmembrane helices. (411 aa)
Psyc_1915Hypothetical protein; Lipolytic enzyme, G-D-S-L family, motif. (280 aa)
Psyc_1945Conserved hypothetical protein. (259 aa)
Psyc_1947Conserved hypothetical protein. (72 aa)
Psyc_1978Conserved hypothetical protein; Possible membrane spanning protein: 3 TM domains. (444 aa)
Psyc_2091Conserved hypothetical protein; Probable transmembrane protein: 11 TM domain. (582 aa)
Psyc_2111Hypothetical protein. (81 aa)
Your Current Organism:
Psychrobacter arcticus
NCBI taxonomy Id: 259536
Other names: P. arcticus 273-4, Psychrobacter arcticus 273-4, Psychrobacter arcticus str. 273-4, Psychrobacter arcticus strain 273-4, Psychrobacter sp. 273-4
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