STRINGSTRING
AEJ00766.1 AEJ00766.1 lptA lptA AEJ00768.1 AEJ00768.1 AEJ01348.1 AEJ01348.1 lptD lptD lptE lptE AEJ02951.1 AEJ02951.1 AEJ02952.1 AEJ02952.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AEJ00766.1PFAM: Protein of unknown function DUF1239; KEGG: nit:NAL212_2117 hypothetical protein. (188 aa)
lptALipopolysaccharide transport periplasmic protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. (176 aa)
AEJ00768.1ABC transporter related protein; KEGG: nit:NAL212_2115 sulfate-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core. (240 aa)
AEJ01348.1PFAM: Permease YjgP/YjgQ, predicted; KEGG: nit:NAL212_2669 permease YjgP/YjgQ family protein. (359 aa)
lptDLPS-assembly protein lptD; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. (744 aa)
lptERare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane; Belongs to the LptE lipoprotein family. (166 aa)
AEJ02951.1PFAM: Permease YjgP/YjgQ, predicted; KEGG: nit:NAL212_2669 permease YjgP/YjgQ family protein. (358 aa)
AEJ02952.1PFAM: Permease YjgP/YjgQ, predicted; KEGG: nit:NAL212_2670 permease YjgP/YjgQ family protein. (353 aa)
Your Current Organism:
Nitrosomonas sp. Is79A3
NCBI taxonomy Id: 261292
Other names: N. sp. Is79A3
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.