STRINGSTRING
AEJ03016.1 AEJ03016.1 AEJ02449.1 AEJ02449.1 AEJ00615.1 AEJ00615.1 AEJ00307.1 AEJ00307.1 AEJ00002.1 AEJ00002.1 AEJ03276.1 AEJ03276.1 AEJ02038.1 AEJ02038.1 AEJ02872.1 AEJ02872.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AEJ03016.1KEGG: nit:NAL212_0609 hypothetical protein. (727 aa)
AEJ02449.1PFAM: Outer membrane efflux protein; KEGG: nit:NAL212_0158 outer membrane efflux protein. (448 aa)
AEJ00615.1PFAM: Outer membrane efflux protein; KEGG: nit:NAL212_0949 outer membrane efflux protein. (422 aa)
AEJ00307.1KEGG: nit:NAL212_2100 type I secretion outer membrane protein, TolC family; TIGRFAM: Type I secretion outer membrane protein, TolC; PFAM: Outer membrane efflux protein. (446 aa)
AEJ00002.1KEGG: nit:NAL212_3171 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein. (464 aa)
AEJ03276.1KEGG: nit:NAL212_3190 type I secretion outer membrane protein, TolC family; TIGRFAM: Type I secretion outer membrane protein, TolC; PFAM: Outer membrane efflux protein. (438 aa)
AEJ02038.1KEGG: app:CAP2UW1_1523 NodT family RND efflux system, outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein. (481 aa)
AEJ02872.1PFAM: Outer membrane efflux protein; KEGG: nit:NAL212_0016 outer membrane efflux protein. (477 aa)
Your Current Organism:
Nitrosomonas sp. Is79A3
NCBI taxonomy Id: 261292
Other names: N. sp. Is79A3
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