STRINGSTRING
SJZ29564.1 SJZ29564.1 SJZ30187.1 SJZ30187.1 SJZ30994.1 SJZ30994.1 SJZ44415.1 SJZ44415.1 SJZ66996.1 SJZ66996.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SJZ29564.1EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). (714 aa)
SJZ30187.1Stage II sporulation protein E (SpoIIE). (770 aa)
SJZ30994.1Hpt domain-containing protein. (663 aa)
SJZ44415.1Diguanylate cyclase (GGDEF) domain-containing protein. (369 aa)
SJZ66996.1His Kinase A (phospho-acceptor) domain-containing protein. (926 aa)
Your Current Organism:
Treponema porcinum
NCBI taxonomy Id: 261392
Other names: ATCC BAA-908, CIP 108245, JCM 12342, T. porcinum, Treponema porcinum Nordhoff et al. 2005, Treponema sp. 14V28, strain 14V28
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