STRINGSTRING
SJZ30884.1 SJZ30884.1 SJZ38880.1 SJZ38880.1 SJZ38900.1 SJZ38900.1 SJZ44288.1 SJZ44288.1 SJZ56544.1 SJZ56544.1 SJZ57298.1 SJZ57298.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SJZ30884.1Membrane protein. (424 aa)
SJZ38880.11,2-diacylglycerol 3-beta-galactosyltransferase. (376 aa)
SJZ38900.1Hypothetical protein. (570 aa)
SJZ44288.1Ig-like domain (group 3). (3783 aa)
SJZ56544.1HD domain-containing protein. (212 aa)
SJZ57298.1Tfp pilus assembly protein PilF. (566 aa)
Your Current Organism:
Treponema porcinum
NCBI taxonomy Id: 261392
Other names: ATCC BAA-908, CIP 108245, JCM 12342, T. porcinum, Treponema porcinum Nordhoff et al. 2005, Treponema sp. 14V28, strain 14V28
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