Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GBAA_0993 | isdG | GBAA_0993 | GBAA_4782 | Conserved hypothetical protein; Identified by match to protein family HMM PF00210; match to protein family HMM PF02915. | Conserved hypothetical protein; Allows bacterial pathogens to use the host heme as an iron source. Catalyzes the oxidative degradation of the heme macrocyclic porphyrin ring to the biliverdin in the presence of a suitable electron donor such as ascorbate or NADPH--cytochrome P450 reductase, with subsequent release of free iron. | 0.921 |
| GBAA_0993 | yetG | GBAA_0993 | GBAA_2987 | Conserved hypothetical protein; Identified by match to protein family HMM PF00210; match to protein family HMM PF02915. | Conserved hypothetical protein; Identified by match to protein family HMM PF03992. | 0.910 |
| GBAA_1875 | GBAA_5637 | GBAA_1875 | GBAA_5637 | Putative coenzyme PQQ synthesis protein; Identified by match to protein family HMM PF04055. | Conserved hypothetical protein; May function as heme-dependent peroxidase. | 0.909 |
| GBAA_1875 | isdG | GBAA_1875 | GBAA_4782 | Putative coenzyme PQQ synthesis protein; Identified by match to protein family HMM PF04055. | Conserved hypothetical protein; Allows bacterial pathogens to use the host heme as an iron source. Catalyzes the oxidative degradation of the heme macrocyclic porphyrin ring to the biliverdin in the presence of a suitable electron donor such as ascorbate or NADPH--cytochrome P450 reductase, with subsequent release of free iron. | 0.903 |
| GBAA_1875 | yetG | GBAA_1875 | GBAA_2987 | Putative coenzyme PQQ synthesis protein; Identified by match to protein family HMM PF04055. | Conserved hypothetical protein; Identified by match to protein family HMM PF03992. | 0.916 |
| GBAA_5637 | GBAA_1875 | GBAA_5637 | GBAA_1875 | Conserved hypothetical protein; May function as heme-dependent peroxidase. | Putative coenzyme PQQ synthesis protein; Identified by match to protein family HMM PF04055. | 0.909 |
| GBAA_5637 | isdG | GBAA_5637 | GBAA_4782 | Conserved hypothetical protein; May function as heme-dependent peroxidase. | Conserved hypothetical protein; Allows bacterial pathogens to use the host heme as an iron source. Catalyzes the oxidative degradation of the heme macrocyclic porphyrin ring to the biliverdin in the presence of a suitable electron donor such as ascorbate or NADPH--cytochrome P450 reductase, with subsequent release of free iron. | 0.920 |
| GBAA_5637 | yetG | GBAA_5637 | GBAA_2987 | Conserved hypothetical protein; May function as heme-dependent peroxidase. | Conserved hypothetical protein; Identified by match to protein family HMM PF03992. | 0.905 |
| isdG | GBAA_0993 | GBAA_4782 | GBAA_0993 | Conserved hypothetical protein; Allows bacterial pathogens to use the host heme as an iron source. Catalyzes the oxidative degradation of the heme macrocyclic porphyrin ring to the biliverdin in the presence of a suitable electron donor such as ascorbate or NADPH--cytochrome P450 reductase, with subsequent release of free iron. | Conserved hypothetical protein; Identified by match to protein family HMM PF00210; match to protein family HMM PF02915. | 0.921 |
| isdG | GBAA_1875 | GBAA_4782 | GBAA_1875 | Conserved hypothetical protein; Allows bacterial pathogens to use the host heme as an iron source. Catalyzes the oxidative degradation of the heme macrocyclic porphyrin ring to the biliverdin in the presence of a suitable electron donor such as ascorbate or NADPH--cytochrome P450 reductase, with subsequent release of free iron. | Putative coenzyme PQQ synthesis protein; Identified by match to protein family HMM PF04055. | 0.903 |
| isdG | GBAA_5637 | GBAA_4782 | GBAA_5637 | Conserved hypothetical protein; Allows bacterial pathogens to use the host heme as an iron source. Catalyzes the oxidative degradation of the heme macrocyclic porphyrin ring to the biliverdin in the presence of a suitable electron donor such as ascorbate or NADPH--cytochrome P450 reductase, with subsequent release of free iron. | Conserved hypothetical protein; May function as heme-dependent peroxidase. | 0.920 |
| isdG | yetG | GBAA_4782 | GBAA_2987 | Conserved hypothetical protein; Allows bacterial pathogens to use the host heme as an iron source. Catalyzes the oxidative degradation of the heme macrocyclic porphyrin ring to the biliverdin in the presence of a suitable electron donor such as ascorbate or NADPH--cytochrome P450 reductase, with subsequent release of free iron. | Conserved hypothetical protein; Identified by match to protein family HMM PF03992. | 0.939 |
| yetG | GBAA_0993 | GBAA_2987 | GBAA_0993 | Conserved hypothetical protein; Identified by match to protein family HMM PF03992. | Conserved hypothetical protein; Identified by match to protein family HMM PF00210; match to protein family HMM PF02915. | 0.910 |
| yetG | GBAA_1875 | GBAA_2987 | GBAA_1875 | Conserved hypothetical protein; Identified by match to protein family HMM PF03992. | Putative coenzyme PQQ synthesis protein; Identified by match to protein family HMM PF04055. | 0.916 |
| yetG | GBAA_5637 | GBAA_2987 | GBAA_5637 | Conserved hypothetical protein; Identified by match to protein family HMM PF03992. | Conserved hypothetical protein; May function as heme-dependent peroxidase. | 0.905 |
| yetG | isdG | GBAA_2987 | GBAA_4782 | Conserved hypothetical protein; Identified by match to protein family HMM PF03992. | Conserved hypothetical protein; Allows bacterial pathogens to use the host heme as an iron source. Catalyzes the oxidative degradation of the heme macrocyclic porphyrin ring to the biliverdin in the presence of a suitable electron donor such as ascorbate or NADPH--cytochrome P450 reductase, with subsequent release of free iron. | 0.939 |