STRINGSTRING
gerD gerD GBAA_0251 GBAA_0251 GBAA_0546 GBAA_0546 sasP1 sasP1 GBAA_1707 GBAA_1707 GBAA_1987 GBAA_1987 cwlJ1 cwlJ1 sasP-1 sasP-1 sasP2 sasP2 sleL sleL cotE cotE GBAA_4061 GBAA_4061 GBAA_4450 GBAA_4450 GBAA_4451 GBAA_4451 GBAA_4629 GBAA_4629 GBAA_5206 GBAA_5206 GBAA_5208 GBAA_5208 GBAA_5633 GBAA_5633 cwlJ2 cwlJ2 gerQ gerQ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gerDSpore germination protein GerD. (205 aa)
GBAA_0251Putative lipoprotein. (337 aa)
GBAA_0546Conserved hypothetical protein. (295 aa)
sasP1Small acid-soluble spore protein; Identified by match to protein family HMM PF00269. (67 aa)
GBAA_1707Transglycosylase, SLT family; Identified by match to protein family HMM PF01464. (261 aa)
GBAA_1987Small, acid-soluble spore protein, alpha/beta family; Identified by match to protein family HMM PF00269. (68 aa)
cwlJ1Cell wall hydrolase; Identified by match to protein family HMM PF07486. (142 aa)
sasP-1Small, acid-soluble spore protein, alpha/beta family; Identified by match to protein family HMM PF00269. (70 aa)
sasP2Small, acid-soluble spore protein; Identified by match to protein family HMM PF00269. (70 aa)
sleLGlycosyl hydrolase, family 18; N-acetylglucosaminidase involved in cortex peptidoglycan degradation during germination. Cleaves only partially degraded spore peptidoglycans. Recognizes muramic acid delta-lactam residues specific to spore peptidoglycans. (430 aa)
cotESpore coat protein E. (180 aa)
GBAA_4061Putative DNA-binding protein; Identified by match to protein family HMM PF00249; match to protein family HMM TIGR02894. (168 aa)
GBAA_4450Putative helicase; Identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04851. (560 aa)
GBAA_4451Conserved hypothetical protein. (264 aa)
GBAA_4629Putative prespore-specific transcriptional regulator rsfA; Identified by match to protein family HMM TIGR02894. (213 aa)
GBAA_5206Peptidase, M23/M37 family; Identified by match to protein family HMM PF01551. (327 aa)
GBAA_5208Conserved hypothetical protein; Identified by match to protein family HMM PF08827. (100 aa)
GBAA_5633Conserved hypothetical protein; Identified by match to protein family HMM TIGR02894. (230 aa)
cwlJ2Cell wall hydrolase; Identified by match to protein family HMM PF07486. (140 aa)
gerQSpore coat protein GerQ; Identified by match to protein family HMM TIGR02728. (145 aa)
Your Current Organism:
Bacillus anthracis
NCBI taxonomy Id: 261594
Other names: B. anthracis str. 'Ames Ancestor', Bacillus anthracis str. 'Ames Ancestor', Bacillus anthracis str. Ames 0581, Bacillus anthracis str. Ames Ancestor
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.