STRINGSTRING
gerD gerD GBAA_0251 GBAA_0251 cotE cotE GBAA_5633 GBAA_5633 cwlJ2 cwlJ2 gerQ gerQ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gerDSpore germination protein GerD. (205 aa)
GBAA_0251Putative lipoprotein. (337 aa)
cotESpore coat protein E. (180 aa)
GBAA_5633Conserved hypothetical protein; Identified by match to protein family HMM TIGR02894. (230 aa)
cwlJ2Cell wall hydrolase; Identified by match to protein family HMM PF07486. (140 aa)
gerQSpore coat protein GerQ; Identified by match to protein family HMM TIGR02728. (145 aa)
Your Current Organism:
Bacillus anthracis
NCBI taxonomy Id: 261594
Other names: B. anthracis str. 'Ames Ancestor', Bacillus anthracis str. 'Ames Ancestor', Bacillus anthracis str. Ames 0581, Bacillus anthracis str. Ames Ancestor
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.