Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cwlJ1 | sleB | GBAA_2594 | GBAA_2748 | Cell wall hydrolase; Identified by match to protein family HMM PF07486. | Spore cortex-lytic enzyme prepeptide; Identified by match to protein family HMM PF01471; match to protein family HMM PF07486; match to protein family HMM TIGR02869. | 0.468 |
| sleB | cwlJ1 | GBAA_2748 | GBAA_2594 | Spore cortex-lytic enzyme prepeptide; Identified by match to protein family HMM PF01471; match to protein family HMM PF07486; match to protein family HMM TIGR02869. | Cell wall hydrolase; Identified by match to protein family HMM PF07486. | 0.468 |