Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| calY | inhA | GBAA_1290 | GBAA_0672 | Camelysin; Identified by similarity to GB:CAD55815.1. | Immune inhibitor A metalloprotease; Identified by similarity to SP:P23382; match to protein family HMM PF05547. | 0.700 |
| cotE | gerQ | GBAA_3906 | GBAA_5641 | Spore coat protein E. | Spore coat protein GerQ; Identified by match to protein family HMM TIGR02728. | 0.958 |
| cotE | safA | GBAA_3906 | GBAA_4659 | Spore coat protein E. | Spore coat assembly protein SafA; Identified by match to protein family HMM PF01476. | 0.876 |
| cotE | sleB | GBAA_3906 | GBAA_2748 | Spore coat protein E. | Spore cortex-lytic enzyme prepeptide; Identified by match to protein family HMM PF01471; match to protein family HMM PF07486; match to protein family HMM TIGR02869. | 0.624 |
| cotE | spoIVA | GBAA_3906 | GBAA_1530 | Spore coat protein E. | Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat outer layers. Directs the assembly of the coat and exosporium to an area around the forespore. | 0.905 |
| cotE | spoVID | GBAA_3906 | GBAA_4692 | Spore coat protein E. | Putative stage VI sporulation protein D; Identified by match to protein family HMM PF01476; match to protein family HMM TIGR02907. | 0.957 |
| cotE | tgl | GBAA_3906 | GBAA_4173 | Spore coat protein E. | Protein-glutamine gamma-glutamyltransferase; Probably plays a role in the assembly of the spore coat proteins by catalyzing epsilon-(gamma-glutamyl)lysine cross-links. Belongs to the bacillus TGase family. | 0.808 |
| cotE | ypeB | GBAA_3906 | GBAA_2747 | Spore coat protein E. | Germination protein YpeB; Identified by match to protein family HMM PF03413; match to protein family HMM TIGR02889. | 0.516 |
| cotE | ytfJ | GBAA_3906 | GBAA_1411 | Spore coat protein E. | Conserved hypothetical protein; Identified by match to protein family HMM TIGR02874. | 0.702 |
| cotE | ytfJ-2 | GBAA_3906 | GBAA_2101 | Spore coat protein E. | Conserved hypothetical protein; Identified by match to protein family HMM TIGR02874. | 0.718 |
| cotE | ytfJ-3 | GBAA_3906 | GBAA_4891 | Spore coat protein E. | Conserved hypothetical protein; Identified by match to protein family HMM TIGR02874. | 0.697 |
| gerQ | cotE | GBAA_5641 | GBAA_3906 | Spore coat protein GerQ; Identified by match to protein family HMM TIGR02728. | Spore coat protein E. | 0.958 |
| gerQ | safA | GBAA_5641 | GBAA_4659 | Spore coat protein GerQ; Identified by match to protein family HMM TIGR02728. | Spore coat assembly protein SafA; Identified by match to protein family HMM PF01476. | 0.831 |
| gerQ | sleB | GBAA_5641 | GBAA_2748 | Spore coat protein GerQ; Identified by match to protein family HMM TIGR02728. | Spore cortex-lytic enzyme prepeptide; Identified by match to protein family HMM PF01471; match to protein family HMM PF07486; match to protein family HMM TIGR02869. | 0.679 |
| gerQ | spoIVA | GBAA_5641 | GBAA_1530 | Spore coat protein GerQ; Identified by match to protein family HMM TIGR02728. | Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat outer layers. Directs the assembly of the coat and exosporium to an area around the forespore. | 0.669 |
| gerQ | spoVID | GBAA_5641 | GBAA_4692 | Spore coat protein GerQ; Identified by match to protein family HMM TIGR02728. | Putative stage VI sporulation protein D; Identified by match to protein family HMM PF01476; match to protein family HMM TIGR02907. | 0.863 |
| gerQ | tgl | GBAA_5641 | GBAA_4173 | Spore coat protein GerQ; Identified by match to protein family HMM TIGR02728. | Protein-glutamine gamma-glutamyltransferase; Probably plays a role in the assembly of the spore coat proteins by catalyzing epsilon-(gamma-glutamyl)lysine cross-links. Belongs to the bacillus TGase family. | 0.695 |
| gerQ | ypeB | GBAA_5641 | GBAA_2747 | Spore coat protein GerQ; Identified by match to protein family HMM TIGR02728. | Germination protein YpeB; Identified by match to protein family HMM PF03413; match to protein family HMM TIGR02889. | 0.671 |
| gerQ | ytfJ | GBAA_5641 | GBAA_1411 | Spore coat protein GerQ; Identified by match to protein family HMM TIGR02728. | Conserved hypothetical protein; Identified by match to protein family HMM TIGR02874. | 0.734 |
| gerQ | ytfJ-2 | GBAA_5641 | GBAA_2101 | Spore coat protein GerQ; Identified by match to protein family HMM TIGR02728. | Conserved hypothetical protein; Identified by match to protein family HMM TIGR02874. | 0.758 |
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