Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GBAA_0399 | nfo | GBAA_0399 | GBAA_4508 | Putative tellurium resistance protein; Identified by match to protein family HMM PF02342. | Deoxyribonuclease IV (phage-T(4)-induced); Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic (AP) sites, generating a 3'-hydroxyl group and a 5'-terminal sugar phosphate. | 0.633 |
| cotE | sleB | GBAA_3906 | GBAA_2748 | Spore coat protein E. | Spore cortex-lytic enzyme prepeptide; Identified by match to protein family HMM PF01471; match to protein family HMM PF07486; match to protein family HMM TIGR02869. | 0.624 |
| cotE | sspB | GBAA_3906 | GBAA_4898 | Spore coat protein E. | Small, acid-soluble spore protein B; Identified by match to protein family HMM PF00269. | 0.778 |
| nfo | GBAA_0399 | GBAA_4508 | GBAA_0399 | Deoxyribonuclease IV (phage-T(4)-induced); Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic (AP) sites, generating a 3'-hydroxyl group and a 5'-terminal sugar phosphate. | Putative tellurium resistance protein; Identified by match to protein family HMM PF02342. | 0.633 |
| sleB | cotE | GBAA_2748 | GBAA_3906 | Spore cortex-lytic enzyme prepeptide; Identified by match to protein family HMM PF01471; match to protein family HMM PF07486; match to protein family HMM TIGR02869. | Spore coat protein E. | 0.624 |
| sleB | sspB | GBAA_2748 | GBAA_4898 | Spore cortex-lytic enzyme prepeptide; Identified by match to protein family HMM PF01471; match to protein family HMM PF07486; match to protein family HMM TIGR02869. | Small, acid-soluble spore protein B; Identified by match to protein family HMM PF00269. | 0.465 |
| sspB | cotE | GBAA_4898 | GBAA_3906 | Small, acid-soluble spore protein B; Identified by match to protein family HMM PF00269. | Spore coat protein E. | 0.778 |
| sspB | sleB | GBAA_4898 | GBAA_2748 | Small, acid-soluble spore protein B; Identified by match to protein family HMM PF00269. | Spore cortex-lytic enzyme prepeptide; Identified by match to protein family HMM PF01471; match to protein family HMM PF07486; match to protein family HMM TIGR02869. | 0.465 |