Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GBAA_1324 | cotE | GBAA_1324 | GBAA_3906 | Small, acid-soluble spore protein, alpha/beta family; Identified by match to protein family HMM PF00269. | Spore coat protein E. | 0.803 |
| GBAA_1324 | gerE | GBAA_1324 | GBAA_4724 | Small, acid-soluble spore protein, alpha/beta family; Identified by match to protein family HMM PF00269. | Germination protein GerE; Identified by match to protein family HMM PF00196; match to protein family HMM PF08281. | 0.691 |
| GBAA_1324 | spoIIID | GBAA_1324 | GBAA_5521 | Small, acid-soluble spore protein, alpha/beta family; Identified by match to protein family HMM PF00269. | Stage III sporulation protein D; Identified by match to protein family HMM TIGR02844. | 0.697 |
| cotE | GBAA_1324 | GBAA_3906 | GBAA_1324 | Spore coat protein E. | Small, acid-soluble spore protein, alpha/beta family; Identified by match to protein family HMM PF00269. | 0.803 |
| cotE | sasP-1 | GBAA_3906 | GBAA_3127 | Spore coat protein E. | Small, acid-soluble spore protein, alpha/beta family; Identified by match to protein family HMM PF00269. | 0.808 |
| cotE | sasP1 | GBAA_3906 | GBAA_0858 | Spore coat protein E. | Small acid-soluble spore protein; Identified by match to protein family HMM PF00269. | 0.814 |
| cotE | sasP2 | GBAA_3906 | GBAA_3130 | Spore coat protein E. | Small, acid-soluble spore protein; Identified by match to protein family HMM PF00269. | 0.817 |
| cotE | spoIIID | GBAA_3906 | GBAA_5521 | Spore coat protein E. | Stage III sporulation protein D; Identified by match to protein family HMM TIGR02844. | 0.866 |
| gerE | GBAA_1324 | GBAA_4724 | GBAA_1324 | Germination protein GerE; Identified by match to protein family HMM PF00196; match to protein family HMM PF08281. | Small, acid-soluble spore protein, alpha/beta family; Identified by match to protein family HMM PF00269. | 0.691 |
| gerE | sasP-1 | GBAA_4724 | GBAA_3127 | Germination protein GerE; Identified by match to protein family HMM PF00196; match to protein family HMM PF08281. | Small, acid-soluble spore protein, alpha/beta family; Identified by match to protein family HMM PF00269. | 0.675 |
| gerE | sasP1 | GBAA_4724 | GBAA_0858 | Germination protein GerE; Identified by match to protein family HMM PF00196; match to protein family HMM PF08281. | Small acid-soluble spore protein; Identified by match to protein family HMM PF00269. | 0.681 |
| gerE | sasP2 | GBAA_4724 | GBAA_3130 | Germination protein GerE; Identified by match to protein family HMM PF00196; match to protein family HMM PF08281. | Small, acid-soluble spore protein; Identified by match to protein family HMM PF00269. | 0.682 |
| gerE | spoIIID | GBAA_4724 | GBAA_5521 | Germination protein GerE; Identified by match to protein family HMM PF00196; match to protein family HMM PF08281. | Stage III sporulation protein D; Identified by match to protein family HMM TIGR02844. | 0.622 |
| sasP-1 | cotE | GBAA_3127 | GBAA_3906 | Small, acid-soluble spore protein, alpha/beta family; Identified by match to protein family HMM PF00269. | Spore coat protein E. | 0.808 |
| sasP-1 | gerE | GBAA_3127 | GBAA_4724 | Small, acid-soluble spore protein, alpha/beta family; Identified by match to protein family HMM PF00269. | Germination protein GerE; Identified by match to protein family HMM PF00196; match to protein family HMM PF08281. | 0.675 |
| sasP-1 | spoIIID | GBAA_3127 | GBAA_5521 | Small, acid-soluble spore protein, alpha/beta family; Identified by match to protein family HMM PF00269. | Stage III sporulation protein D; Identified by match to protein family HMM TIGR02844. | 0.698 |
| sasP1 | cotE | GBAA_0858 | GBAA_3906 | Small acid-soluble spore protein; Identified by match to protein family HMM PF00269. | Spore coat protein E. | 0.814 |
| sasP1 | gerE | GBAA_0858 | GBAA_4724 | Small acid-soluble spore protein; Identified by match to protein family HMM PF00269. | Germination protein GerE; Identified by match to protein family HMM PF00196; match to protein family HMM PF08281. | 0.681 |
| sasP1 | spoIIID | GBAA_0858 | GBAA_5521 | Small acid-soluble spore protein; Identified by match to protein family HMM PF00269. | Stage III sporulation protein D; Identified by match to protein family HMM TIGR02844. | 0.718 |
| sasP2 | cotE | GBAA_3130 | GBAA_3906 | Small, acid-soluble spore protein; Identified by match to protein family HMM PF00269. | Spore coat protein E. | 0.817 |
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