STRINGSTRING
MAP_0153 MAP_0153 MAP_0259 MAP_0259 MAP_0260 MAP_0260 phoP phoP phoR phoR MAP_0833c MAP_0833c MAP_0834c MAP_0834c MAP_1101 MAP_1101 tcrA tcrA MAP_1221 MAP_1221 MAP_1222 MAP_1222 MAP_2948 MAP_2948 senX3 senX3 regX3 regX3 whiB3 whiB3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MAP_0153Hypothetical protein. (442 aa)
MAP_0259Hypothetical protein. (246 aa)
MAP_0260Hypothetical protein. (496 aa)
phoPPhoP. (239 aa)
phoRPhoR. (478 aa)
MAP_0833cHypothetical protein. (451 aa)
MAP_0834cHypothetical protein. (233 aa)
MAP_1101Hypothetical protein. (467 aa)
tcrATcrA. (222 aa)
MAP_1221Hypothetical protein. (219 aa)
MAP_1222Hypothetical protein. (480 aa)
MAP_2948Hypothetical protein. (253 aa)
senX3SenX3. (409 aa)
regX3RegX3. (227 aa)
whiB3WhiB3; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (102 aa)
Your Current Organism:
Mycobacterium avium
NCBI taxonomy Id: 262316
Other names: M. avium subsp. paratuberculosis K-10, Mycobacterium avium subsp. paratuberculosis K-10, Mycobacterium avium subsp. paratuberculosis K10, Mycobacterium avium subsp. paratuberculosis str. K-10, Mycobacterium avium subsp. paratuberculosis strain K-10
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