STRINGSTRING
AEB47458.1 AEB47458.1 AEB47622.1 AEB47622.1 AEB47826.1 AEB47826.1 AEB42633.1 AEB42633.1 AEB45283.1 AEB45283.1 AEB45309.1 AEB45309.1 AEB45781.1 AEB45781.1 AEB45830.1 AEB45830.1 rbpA-2 rbpA-2 AEB46840.1 AEB46840.1 AEB46983.1 AEB46983.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AEB47458.1Xylose isomerase domain-containing protein; COG1082 Sugar phosphate isomerases/epimerases. (262 aa)
AEB47622.1Hypothetical protein. (116 aa)
AEB47826.1Abortive infection protein; COG1266 Predicted metal-dependent membrane protease. (256 aa)
AEB42633.1Putative Lsr2-like protein. (117 aa)
AEB45283.1Hypothetical protein. (196 aa)
AEB45309.1Hypothetical protein. (194 aa)
AEB45781.1Hypothetical protein. (291 aa)
AEB45830.1Hypothetical protein. (107 aa)
rbpA-2Electron transport protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. (114 aa)
AEB46840.1Hypothetical protein. (194 aa)
AEB46983.1Hypothetical protein. (194 aa)
Your Current Organism:
Verrucosispora maris
NCBI taxonomy Id: 263358
Other names: V. maris AB-18-032, Verrucosispora maris AB-18-032, Verrucosispora maris str. AB-18-032, Verrucosispora maris strain AB-18-032, Verrucosispora sp. AB-18-032
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