STRINGSTRING
KOO49340.1 KOO49340.1 KOO49658.1 KOO49658.1 KOO49761.1 KOO49761.1 KOO49922.1 KOO49922.1 KOO47225.1 KOO47225.1 KOO47226.1 KOO47226.1 KOO47227.1 KOO47227.1 KOO47228.1 KOO47228.1 KOO47229.1 KOO47229.1 KOO47230.1 KOO47230.1 KOO47231.1 KOO47231.1 KOO47320.1 KOO47320.1 KOO47436.1 KOO47436.1 KOO47385.1 KOO47385.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KOO49340.1Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)
KOO49658.14-hydroxyphenylacetate 3-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (486 aa)
KOO49761.14-oxalocrotonate tautomerase; 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family. (61 aa)
KOO49922.1Oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (166 aa)
KOO47225.1MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (143 aa)
KOO47226.1Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
KOO47227.1Reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa)
KOO47228.1MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (147 aa)
KOO47229.1Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)
KOO47230.1Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (352 aa)
KOO47231.1FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (188 aa)
KOO47320.1Carboxylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (201 aa)
KOO47436.1Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
KOO47385.1Ring-cleaving dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa)
Your Current Organism:
Viridibacillus arvi
NCBI taxonomy Id: 263475
Other names: Bacillus arvi, Bacillus arvi Heyrman et al. 2005, Bacillus sp. 433-D9, DSM 16317, LMG 22165, LMG:22165, V. arvi, Viridibacillus arvi (Heyrman et al. 2005) Albert et al. 2007
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