(5 nodes) ABC transporters network (Picrophilus torridus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTO1088	Sugar binding protein. (388 aa)
	PTO1390	Alpha glucoside ABC transporter solute binding protein. (275 aa)
	PTO1392	Alpha glucoside ABC transporter permease protein. (284 aa)
	PTO1393	Alpha glucoside ABC transporter permease protein. (277 aa)
	PTO1394	Alpha glucoside ABC transporter ATP-binding protein. (377 aa)

Your Current Organism:

Picrophilus torridus

NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
PTO1088	PTO1390	Sugar binding protein.	Alpha glucoside ABC transporter solute binding protein.	0.901
PTO1088	PTO1392	Sugar binding protein.	Alpha glucoside ABC transporter permease protein.	0.953
PTO1088	PTO1393	Sugar binding protein.	Alpha glucoside ABC transporter permease protein.	0.949
PTO1088	PTO1394	Sugar binding protein.	Alpha glucoside ABC transporter ATP-binding protein.	0.806
PTO1390	PTO1088	Alpha glucoside ABC transporter solute binding protein.	Sugar binding protein.	0.901
PTO1390	PTO1392	Alpha glucoside ABC transporter solute binding protein.	Alpha glucoside ABC transporter permease protein.	0.977
PTO1390	PTO1393	Alpha glucoside ABC transporter solute binding protein.	Alpha glucoside ABC transporter permease protein.	0.975
PTO1390	PTO1394	Alpha glucoside ABC transporter solute binding protein.	Alpha glucoside ABC transporter ATP-binding protein.	0.906
PTO1392	PTO1088	Alpha glucoside ABC transporter permease protein.	Sugar binding protein.	0.953
PTO1392	PTO1390	Alpha glucoside ABC transporter permease protein.	Alpha glucoside ABC transporter solute binding protein.	0.977
PTO1392	PTO1393	Alpha glucoside ABC transporter permease protein.	Alpha glucoside ABC transporter permease protein.	0.996
PTO1392	PTO1394	Alpha glucoside ABC transporter permease protein.	Alpha glucoside ABC transporter ATP-binding protein.	0.960
PTO1393	PTO1088	Alpha glucoside ABC transporter permease protein.	Sugar binding protein.	0.949
PTO1393	PTO1390	Alpha glucoside ABC transporter permease protein.	Alpha glucoside ABC transporter solute binding protein.	0.975
PTO1393	PTO1392	Alpha glucoside ABC transporter permease protein.	Alpha glucoside ABC transporter permease protein.	0.996
PTO1393	PTO1394	Alpha glucoside ABC transporter permease protein.	Alpha glucoside ABC transporter ATP-binding protein.	0.965
PTO1394	PTO1088	Alpha glucoside ABC transporter ATP-binding protein.	Sugar binding protein.	0.806
PTO1394	PTO1390	Alpha glucoside ABC transporter ATP-binding protein.	Alpha glucoside ABC transporter solute binding protein.	0.906
PTO1394	PTO1392	Alpha glucoside ABC transporter ATP-binding protein.	Alpha glucoside ABC transporter permease protein.	0.960
PTO1394	PTO1393	Alpha glucoside ABC transporter ATP-binding protein.	Alpha glucoside ABC transporter permease protein.	0.965

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