Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AAZ59401.1 | AAZ60180.1 | Reut_A0019 | Reut_A0800 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | 0.934 |
| AAZ59401.1 | AAZ60672.1 | Reut_A0019 | Reut_A1302 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | PAS/PAC sensor signal transduction histidine kinase. | 0.531 |
| AAZ59401.1 | AAZ61006.1 | Reut_A0019 | Reut_A1640 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | Diguanylate cyclase/phosphodiesterase. | 0.753 |
| AAZ59401.1 | AAZ61101.1 | Reut_A0019 | Reut_A1736 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | 0.823 |
| AAZ59401.1 | AAZ61114.1 | Reut_A0019 | Reut_A1749 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | PAS:GGDEF. | 0.848 |
| AAZ59401.1 | AAZ61322.1 | Reut_A0019 | Reut_A1958 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Hpt. | 0.548 |
| AAZ59401.1 | AAZ61525.1 | Reut_A0019 | Reut_A2161 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | PAS/PAC sensor signal transduction histidine kinase. | 0.421 |
| AAZ59401.1 | AAZ61566.1 | Reut_A0019 | Reut_A2203 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | PAS:GGDEF. | 0.686 |
| AAZ59401.1 | AAZ61814.1 | Reut_A0019 | Reut_A2452 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | PAS. | 0.710 |
| AAZ59401.1 | AAZ61824.1 | Reut_A0019 | Reut_A2462 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | PAS:GGDEF. | 0.830 |
| AAZ59401.1 | AAZ62027.1 | Reut_A0019 | Reut_A2666 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | PAS:GGDEF. | 0.944 |
| AAZ59401.1 | AAZ63425.1 | Reut_A0019 | Reut_B4069 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | PAS/PAC sensor hybrid histidine kinase. | 0.940 |
| AAZ59401.1 | AAZ63468.1 | Reut_A0019 | Reut_B4112 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | PAS/PAC sensor hybrid histidine kinase. | 0.891 |
| AAZ59401.1 | AAZ63471.1 | Reut_A0019 | Reut_B4117 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | PAS. | 0.531 |
| AAZ59401.1 | AAZ63697.1 | Reut_A0019 | Reut_B4344 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | PAS:GGDEF. | 0.445 |
| AAZ59401.1 | AAZ63821.1 | Reut_A0019 | Reut_B4471 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | PAS/PAC sensor hybrid histidine kinase. | 0.905 |
| AAZ59401.1 | AAZ64263.1 | Reut_A0019 | Reut_B4915 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | PAS; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.811 |
| AAZ59401.1 | AAZ64323.1 | Reut_A0019 | Reut_B4975 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | PAS/PAC sensor hybrid histidine kinase. | 0.894 |
| AAZ59401.1 | AAZ64391.1 | Reut_A0019 | Reut_B5043 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | PAS. | 0.895 |
| AAZ59401.1 | AAZ64429.1 | Reut_A0019 | Reut_B5081 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | PAS. | 0.731 |
page 1 of 37