STRINGSTRING
int int stu0155 stu0155 queA queA stu0821 stu0821 stu0823 stu0823 stu0824 stu0824 queC queC ptpS ptpS queE queE queF queF stu0879 stu0879 stu1555 stu1555 tgt tgt tnp657 tnp657 cshA cshA stu1959 stu1959 stu1960 stu1960 stu1961 stu1961 stu1962 stu1962 nrdD nrdD stu1964 stu1964 stu1965 stu1965 nrdG nrdG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
intIntegrase/recombinase, phage integrase family; Belongs to the 'phage' integrase family. (405 aa)
stu0155Conserved hypothetical, predicted membrane protein (TMS5). (193 aa)
queAS-adenosylmethionine-tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). (347 aa)
stu0821IS1193, transposase, ISL3 family, truncated; Truncated. (72 aa)
stu0823IS1193, transposase, ISL3 family, truncated; Truncated. (45 aa)
stu0824Conserved hypothetical protein, translation initiation inhibitor protein. (126 aa)
queCConserved hypothetical protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). (217 aa)
ptpS6-pyruvoyl tetrahydrobiopterin synthase, putative. (147 aa)
queEHypothetical protein, coenzyme PQQ synthesis homologue; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. (238 aa)
queFConserved hypothetical protein; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily. (178 aa)
stu0879SOS responce UmuC protein, truncated; Truncated. (273 aa)
stu1555Conserved hypothetical, predicted membrane protein (TMS5). (173 aa)
tgtQueuine tRNA-ribosyltransferase (tRNA-guanine transglycosylase); Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on [...] (380 aa)
tnp657IS657, transposase, IS200 family. (157 aa)
cshAChromosome segregation helicase. (422 aa)
stu1959Conserved hypothetical protein; Belongs to the UPF0297 family. (88 aa)
stu1960DNA recombination protein, putative; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. (139 aa)
stu1961Conserved hypothetical protein; Belongs to the UPF0473 family. (111 aa)
stu1962Conserved hypothetical, predicted membrane protein (TMS12). (548 aa)
nrdDAnaerobic ribonucleoside-triphosphate reductase. (734 aa)
stu1964Conserved hypothetical protein. (43 aa)
stu1965Acetyltransferase, GNAT family. (166 aa)
nrdGAnaerobic ribonucleotide reductase activator; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. (201 aa)
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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