Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| nifS2 | nifS3 | stu0411 | stu1461 | Aminotransferase (class V), putative. | Aminotransferase (class V), putative. | 0.916 |
| nifS2 | stu0545 | stu0411 | stu0545 | Aminotransferase (class V), putative. | Molybdopterin biosynthesis protein (HesA/MoeB/ThiF family protein), putative. | 0.951 |
| nifS2 | thiI | stu0411 | stu0412 | Aminotransferase (class V), putative. | Thiamine biosynthesis protein; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.988 |
| nifS2 | trmU | stu0411 | stu2003 | Aminotransferase (class V), putative. | tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.406 |
| nifS3 | nifS2 | stu1461 | stu0411 | Aminotransferase (class V), putative. | Aminotransferase (class V), putative. | 0.916 |
| nifS3 | stu0545 | stu1461 | stu0545 | Aminotransferase (class V), putative. | Molybdopterin biosynthesis protein (HesA/MoeB/ThiF family protein), putative. | 0.951 |
| nifS3 | thiI | stu1461 | stu0412 | Aminotransferase (class V), putative. | Thiamine biosynthesis protein; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.967 |
| nifS3 | trmU | stu1461 | stu2003 | Aminotransferase (class V), putative. | tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.450 |
| stu0545 | nifS2 | stu0545 | stu0411 | Molybdopterin biosynthesis protein (HesA/MoeB/ThiF family protein), putative. | Aminotransferase (class V), putative. | 0.951 |
| stu0545 | nifS3 | stu0545 | stu1461 | Molybdopterin biosynthesis protein (HesA/MoeB/ThiF family protein), putative. | Aminotransferase (class V), putative. | 0.951 |
| thiI | nifS2 | stu0412 | stu0411 | Thiamine biosynthesis protein; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | Aminotransferase (class V), putative. | 0.988 |
| thiI | nifS3 | stu0412 | stu1461 | Thiamine biosynthesis protein; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | Aminotransferase (class V), putative. | 0.967 |
| thiI | trmU | stu0412 | stu2003 | Thiamine biosynthesis protein; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.884 |
| trmU | nifS2 | stu2003 | stu0411 | tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | Aminotransferase (class V), putative. | 0.406 |
| trmU | nifS3 | stu2003 | stu1461 | tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | Aminotransferase (class V), putative. | 0.450 |
| trmU | thiI | stu2003 | stu0412 | tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | Thiamine biosynthesis protein; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.884 |