STRINGSTRING
FB00_03370 FB00_03370 FB00_03375 FB00_03375 FB00_05160 FB00_05160 FB00_06250 FB00_06250 FB00_06255 FB00_06255 FB00_06705 FB00_06705 FB00_06710 FB00_06710 FB00_06715 FB00_06715 FB00_09785 FB00_09785 FB00_09790 FB00_09790 FB00_14495 FB00_14495 FB00_14500 FB00_14500 FB00_14505 FB00_14505 FB00_14510 FB00_14510 FB00_14515 FB00_14515 FB00_17260 FB00_17260 FB00_17265 FB00_17265 FB00_17270 FB00_17270
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FB00_03370Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (889 aa)
FB00_03375ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)
FB00_05160Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (485 aa)
FB00_06250Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (457 aa)
FB00_06255ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
FB00_06705Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (852 aa)
FB00_06710Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)
FB00_06715Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (71 aa)
FB00_09785ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
FB00_09790ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (373 aa)
FB00_14495Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (497 aa)
FB00_14500ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
FB00_14505Macrolide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (405 aa)
FB00_14510Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)
FB00_14515Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (154 aa)
FB00_17260Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (403 aa)
FB00_17265ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
FB00_17270Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)
Your Current Organism:
Cellulosimicrobium funkei
NCBI taxonomy Id: 264251
Other names: ATCC BAA-886, C. funkei, CCUG 50705, Cellulosimicrobium funkei Brown et al. 2006, Cellulosimicrobium sp. AR6, Cellulosimicrobium sp. AR8, DSM 16025, JCM 14302, NBRC 104118, NCTC 13516, strain W6122
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