STRINGSTRING
FB00_19750 FB00_19750 FB00_00860 FB00_00860 FB00_03375 FB00_03375 FB00_06255 FB00_06255 FB00_06710 FB00_06710 FB00_09210 FB00_09210 FB00_09785 FB00_09785 FB00_11450 FB00_11450 FB00_12785 FB00_12785 FB00_13355 FB00_13355 FB00_14500 FB00_14500 FB00_14625 FB00_14625 FB00_14945 FB00_14945 FB00_15355 FB00_15355 FB00_16545 FB00_16545 FB00_17265 FB00_17265 FB00_17895 FB00_17895 FB00_18880 FB00_18880 FB00_21015 FB00_21015
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FB00_19750Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)
FB00_00860Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (658 aa)
FB00_03375ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)
FB00_06255ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
FB00_06710Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)
FB00_09210Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)
FB00_09785ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
FB00_11450ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
FB00_12785Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
FB00_13355Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)
FB00_14500ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
FB00_14625Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (114 aa)
FB00_14945ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
FB00_15355Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
FB00_16545NADP oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)
FB00_17265ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
FB00_17895Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
FB00_18880Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (200 aa)
FB00_21015Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)
Your Current Organism:
Cellulosimicrobium funkei
NCBI taxonomy Id: 264251
Other names: ATCC BAA-886, C. funkei, CCUG 50705, Cellulosimicrobium funkei Brown et al. 2006, Cellulosimicrobium sp. AR6, Cellulosimicrobium sp. AR8, DSM 16025, JCM 14302, NBRC 104118, NCTC 13516, strain W6122
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