STRINGSTRING
FB00_18460 FB00_18460 FB00_00700 FB00_00700 FB00_01845 FB00_01845 FB00_01945 FB00_01945 FB00_02045 FB00_02045 FB00_02055 FB00_02055 FB00_02105 FB00_02105 FB00_03620 FB00_03620 FB00_03700 FB00_03700 FB00_03710 FB00_03710 FB00_03770 FB00_03770 FB00_03820 FB00_03820 FB00_03930 FB00_03930 FB00_04185 FB00_04185 FB00_04305 FB00_04305 FB00_04325 FB00_04325 FB00_06175 FB00_06175 FB00_06565 FB00_06565 FB00_06645 FB00_06645 FB00_08265 FB00_08265 FB00_10160 FB00_10160 FB00_10900 FB00_10900 FB00_11045 FB00_11045 FB00_11050 FB00_11050 FB00_11535 FB00_11535 FB00_13850 FB00_13850 FB00_13880 FB00_13880 FB00_14145 FB00_14145 FB00_14450 FB00_14450 FB00_14465 FB00_14465 FB00_17210 FB00_17210 FB00_17305 FB00_17305 FB00_17350 FB00_17350 FB00_17650 FB00_17650 FB00_00275 FB00_00275 FB00_18920 FB00_18920 FB00_19085 FB00_19085 FB00_19205 FB00_19205 FB00_20965 FB00_20965 FB00_00270 FB00_00270
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FB00_18460Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)
FB00_00700Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
FB00_01845Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa)
FB00_01945LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa)
FB00_02045Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)
FB00_02055Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (336 aa)
FB00_02105LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (369 aa)
FB00_03620LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)
FB00_03700LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa)
FB00_03710LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)
FB00_03770LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (659 aa)
FB00_03820LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (348 aa)
FB00_03930LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (355 aa)
FB00_04185LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)
FB00_04305LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa)
FB00_04325LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
FB00_06175Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (336 aa)
FB00_06565LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)
FB00_06645LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
FB00_08265ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
FB00_10160Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa)
FB00_10900Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (351 aa)
FB00_11045Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
FB00_11050LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (339 aa)
FB00_11535LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (352 aa)
FB00_13850Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa)
FB00_13880Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (372 aa)
FB00_14145Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa)
FB00_14450Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (375 aa)
FB00_14465Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa)
FB00_17210Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (369 aa)
FB00_17305ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (376 aa)
FB00_17350Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (355 aa)
FB00_17650LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa)
FB00_00275LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (355 aa)
FB00_18920Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa)
FB00_19085LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)
FB00_19205Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (368 aa)
FB00_20965ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (372 aa)
FB00_00270Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)
Your Current Organism:
Cellulosimicrobium funkei
NCBI taxonomy Id: 264251
Other names: ATCC BAA-886, C. funkei, CCUG 50705, Cellulosimicrobium funkei Brown et al. 2006, Cellulosimicrobium sp. AR6, Cellulosimicrobium sp. AR8, DSM 16025, JCM 14302, NBRC 104118, NCTC 13516, strain W6122
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